RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TACSTD2P09758 323 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 PNMA6AP0CW24 399 aaPredicted RBP3.92□□□□□ -1.78
LSM5-205ENST00000409952 GCKP35557 465 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 RFC3P40938 356 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 AQP2P41181 271 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 OR2B6P58173 313 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 SLAMF1Q13291 335 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 LTB4RQ15722 352 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 PSMD5Q16401 504 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 CATSPER3Q86XQ3 398 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 PLCZ1Q86YW0 608 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 NELFCDQ8IXH7 590 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 ZNF557Q8N988 423 aaPredicted RBP3.92□□□□□ -1.78
LSM5-205ENST00000409952 ZNF565Q8N9K5 539 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 SNX31Q8N9S9 440 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 ZNF740Q8NDX6 193 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 ITFG1Q8TB96 612 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 C17orf50Q8WW18 174 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 CDKL2Q92772 493 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 UPF3BQ9BZI7 483 aaKnown RBP3.92□□□□□ -1.78
LSM5-205ENST00000409952 ULBP2Q9BZM5 246 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 EML4Q9HC35 981 aaKnown RBP3.92□□□□□ -1.78
LSM5-205ENST00000409952 NECAP2Q9NVZ3 263 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 MCUBQ9NWR8 336 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 NKIRAS1Q9NYS0 192 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 CLEC2DQ9UHP7 191 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 GOLT1BQ9Y3E0 138 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 CBY1Q9Y3M2 126 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 IGHV1OR21-1A0A087WYE8 117 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 SMIM28A0A1B0GU29 152 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 A0A1B0GW55 424 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 MGAT4DA6NG13 374 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 TOR1AO14656 332 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ITGB1BP1O14713 200 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 MGRN1O60291 552 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 MPDU1O75352 247 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 SC5DO75845 299 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 LSM8O95777 96 aaKnown RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 PATE4P0C8F1 98 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4L2P0CJ85 424 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4L3P0CJ86 424 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4L4P0CJ87 422 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4L5P0CJ88 424 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4L6P0CJ89 424 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4L7P0CJ90 424 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 TCN1P20061 433 aaPredicted RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 LMO2P25791 158 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 PCK1P35558 622 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 KIR2DS2P43631 304 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 CSNK1A1P48729 337 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 GSK3BP49841 420 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ERVPABLB-1P60509 514 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 STXBP1P61764 594 aaKnown RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 ACTA2P62736 377 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ACTG2P63267 376 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ACTC1P68032 377 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ACTA1P68133 377 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 MRPS15P82914 257 aaKnown RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 ECH1Q13011 328 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 PIGHQ14442 188 aaPredicted RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 SLC10A1Q14973 349 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ABRAXAS2Q15018 415 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 MARCH8Q5T0T0 291 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ZNF691Q5VV52 312 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ADAM5Q6NVV9 412 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4L9Q6RFH8 374 aaPredicted RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 TMIGD1Q6UXZ0 262 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 PRR22Q8IZ63 422 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 PUSL1Q8N0Z8 303 aaKnown RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 OR51F2Q8NH61 342 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ACOT11Q8WXI4 607 aaPredicted RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 RPEQ96AT9 228 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 LRRC45Q96CN5 670 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ZNF514Q96K75 400 aaPredicted RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 ALS2CR12Q96Q35 445 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 OR5B12Q96R08 314 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 SYT15Q9BQS2 421 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 SRXN1Q9BYN0 137 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 C1orf198Q9H425 327 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 NXF3Q9H4D5 531 aaKnown RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 TMEM38AQ9H6F2 299 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ARMC7Q9H6L4 198 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 IMPAD1Q9NX62 359 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 CLEC5AQ9NY25 188 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 RBAKQ9NYW8 714 aaPredicted RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 DUX4Q9UBX2 424 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 ZNF580Q9UK33 172 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 NXT1Q9UKK6 140 aaKnown RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 PSMD13Q9UNM6 376 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 MRPS28Q9Y2Q9 187 aaKnown RBP3.91□□□□□ -1.78
LSM5-205ENST00000409952 PPIL1Q9Y3C6 166 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 HYOU1Q9Y4L1 999 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 PUS1Q9Y606 427 aaKnown RBP eCLIP3.91□□□□□ -1.78
LSM5-205ENST00000409952 FANCIQ9NVI1 1328 aa3.91□□□□□ -1.78
LSM5-205ENST00000409952 IGKV1D-8A0A087WSZ0 117 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 ZNF487B1APH4 448 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 H3BN98 237 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 RAD51BO15315 384 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 SNAI2O43623 268 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 ZSCAN5DPP0CG00 497 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms