RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 GPR35Q9HC97 309 aa18.19■□□□□ 0.5
C4orf48-202ENST00000409860 GALNT8Q9NY28 637 aa18.19■□□□□ 0.5
C4orf48-202ENST00000409860 SMPD3Q9NY59 655 aaPredicted RBP18.19■□□□□ 0.5
C4orf48-202ENST00000409860 ZAR1LA6NP61 321 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 QDPRP09417 244 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 MPGP29372 298 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 CD79BP40259 229 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 HIST3H3Q16695 136 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 ZIK1Q3SY52 487 aaPredicted RBP18.18■□□□□ 0.5
C4orf48-202ENST00000409860 PHYHD1Q5SRE7 291 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 THEM4Q5T1C6 240 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 TMEM236Q5W0B7 351 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 ACSM5Q6NUN0 579 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 PTCHD4Q6ZW05 846 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 SDR9C7Q8NEX9 313 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 RNASE6Q93091 150 aaKnown RBP18.18■□□□□ 0.5
C4orf48-202ENST00000409860 PLEKHA8Q96JA3 519 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 SLC38A2Q96QD8 506 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 NMNAT3Q96T66 252 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 TOR3AQ9H497 397 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 CRLF2Q9HC73 371 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 CMC2Q9NRP2 79 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 TAS2R16Q9NYV7 291 aa18.18■□□□□ 0.5
C4orf48-202ENST00000409860 VSX1Q9NZR4 365 aaPredicted RBP18.18■□□□□ 0.5
C4orf48-202ENST00000409860 SLC22A23A1A5C7 686 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 RPL36A-HNRNPH2H7BZ11 118 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 RNF224P0DH78 156 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 ZNF3P17036 446 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 COX5AP20674 150 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 IGHV1-2P23083 117 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 EPHA2P29317 976 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 CDKN2AP42771 156 aaKnown RBP18.17■□□□□ 0.5
C4orf48-202ENST00000409860 PCYT1AP49585 367 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 TGFBR3Q03167 851 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 STK11Q15831 433 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 CEACAM16Q2WEN9 425 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 SLX4IPQ5VYV7 408 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 LINGO2Q7L985 606 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 CXorf67Q86X51 503 aaPredicted RBP18.17■□□□□ 0.5
C4orf48-202ENST00000409860 MCHR2Q969V1 340 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 SYT4Q9H2B2 425 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 UBR5O95071 2799 aaPredicted RBP18.17■□□□□ 0.5
C4orf48-202ENST00000409860 RELNP78509 3460 aa18.17■□□□□ 0.5
C4orf48-202ENST00000409860 DHHO43323 396 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 SNAP29O95721 258 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 ITGA5P08648 1049 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 IL32P24001 234 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 POLR2IP36954 125 aaKnown RBP18.16■□□□□ 0.5
C4orf48-202ENST00000409860 ZNF84P51523 738 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 SH3BGRP55822 239 aaPredicted RBP18.16■□□□□ 0.5
C4orf48-202ENST00000409860 FMODQ06828 376 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 C9orf135Q5VTT2 229 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 LRFN4Q6PJG9 635 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 DNM1P34Q6PK57 102 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 SLC37A3Q8NCC5 494 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 NRG4Q8WWG1 115 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 KISS1RQ969F8 398 aaPredicted RBP18.16■□□□□ 0.5
C4orf48-202ENST00000409860 NMD3Q96D46 503 aaKnown RBP18.16■□□□□ 0.5
C4orf48-202ENST00000409860 MBOAT4Q96T53 435 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 HDHD5Q9BXW7 423 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 TVP23BQ9NYZ1 205 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 GPR52Q9Y2T5 361 aa18.16■□□□□ 0.5
C4orf48-202ENST00000409860 CIB4A0PJX0 185 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 SURF4O15260 269 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 LYZL6O75951 148 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 SLC2A10O95528 541 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 PSMB1P20618 241 aaKnown RBP18.15■□□□□ 0.5
C4orf48-202ENST00000409860 PAICSP22234 425 aaKnown RBP18.15■□□□□ 0.5
C4orf48-202ENST00000409860 CRABP1P29762 137 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 ZNF133P52736 654 aaPredicted RBP18.15■□□□□ 0.5
C4orf48-202ENST00000409860 TFF3Q07654 80 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 FAM27E3Q08E93 113 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 SNAPC1Q16533 368 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 C10orf128Q5T292 105 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 SFRP5Q5T4F7 317 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 C12orf73Q69YU5 71 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 STAC2Q6ZMT1 411 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 ZNF433Q8N7K0 673 aaPredicted RBP18.15■□□□□ 0.5
C4orf48-202ENST00000409860 NPEPL1Q8NDH3 523 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 NSMAFQ92636 917 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 GRIP2Q9C0E4 1043 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 ALPK2Q86TB3 2170 aa18.15■□□□□ 0.5
C4orf48-202ENST00000409860 ZNF99A8MXY4 864 aaPredicted RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 C16orf97H3BN30 126 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 SLC16A7O60669 478 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 KHDRBS3O75525 346 aaKnown RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 PTDSS1P48651 473 aaKnown RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 FOXG1P55316 489 aaPredicted RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 CDC42P60953 191 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 CRMP1Q14194 572 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 FBXW10Q5XX13 1052 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 SLC25A47Q6Q0C1 308 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 BHLHA15Q7RTS1 189 aaPredicted RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 CYB561A3Q8NBI2 242 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 ZNF555Q8NEP9 628 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 C1orf162Q8NEQ5 155 aaPredicted RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 STEAP2Q8NFT2 490 aa18.14■□□□□ 0.49
C4orf48-202ENST00000409860 RPRD1BQ9NQG5 326 aaKnown RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 KLF2Q9Y5W3 355 aaPredicted RBP18.14■□□□□ 0.49
C4orf48-202ENST00000409860 OR6C68A6NDL8 312 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms