RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 MCIDASD6RGH6 385 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 hCG_2039718K7EN88 272 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 TLX2O43763 284 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 RAB36O95755 333 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 ZNF682O95780 498 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 GSK3BP49841 420 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 NUDT2P50583 147 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 SEC24CP53992 1094 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 RUNX1T1Q06455 604 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 SNTB2Q13425 540 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 NRN1LQ496H8 165 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 KRT80Q6KB66 452 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 CBLL1Q75N03 491 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 DPPA2Q7Z7J5 298 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 OFCC1Q8IZS5 231 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 MOSPD2Q8NHP6 518 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 GEMIN6Q8WXD5 167 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 MCHR2Q969V1 340 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 BPIFA2Q96DR5 249 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 TNFRSF13CQ96RJ3 184 aa16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 STX18Q9P2W9 335 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-209ENST00000409543 SONP18583 2426 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 TMEM129A0AVI4 362 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 GPRIN2O60269 458 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 PIP5K1CO60331 668 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 TRMUO75648 421 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 FARS2O95363 451 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 SERPINA5P05154 406 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 ACADSP16219 412 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 PDLIM4P50479 330 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 LAPTM4AQ15012 233 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 TRAM2Q15035 370 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 IFI44LQ53G44 452 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 ARMC4Q5T2S8 1044 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 ANKS4BQ8N8V4 417 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 NOXO1Q8NFA2 376 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 FGFBP3Q8TAT2 258 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 ZNF347Q96SE7 839 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 FNDC11Q9BVV2 318 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 RAB1BQ9H0U4 201 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 MYOZ1Q9NP98 299 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 HIF3AQ9Y2N7 669 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 CMAHPQ9Y471 501 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 SNX13Q9Y5W8 968 aa16.94■□□□□ 0.3
TSPAN4-209ENST00000409543 NDUFS8O00217 210 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 FFAR1O14842 300 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 CRLF1O75462 422 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 PATE4P0C8F1 98 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 IFI30P13284 250 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 FUT4P22083 530 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 PRDX6P30041 224 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 YAP1P46937 504 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 ZNF84P51523 738 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 ZNF133P52736 654 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 PSME3P61289 254 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 LSM11P83369 360 aaKnown RBP eCLIP16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 RAB39AQ14964 217 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 TMEM249Q2WGJ8 235 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 FKBP9P1Q75LS8 142 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 SVOPLQ8N434 492 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 SYT14Q8NB59 555 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 OR4K5Q8NGD3 323 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 SH3GL3Q99963 347 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 KCTD14Q9BQ13 255 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 MAN2C1Q9NTJ4 1040 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 RHCGQ9UBD6 479 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 ABCD2Q9UBJ2 740 aa16.93■□□□□ 0.3
TSPAN4-209ENST00000409543 VWC2LB2RUY7 222 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 J3KTA2 159 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 MGRN1O60291 552 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 SERPINA1P01009 418 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 USF1P22415 310 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 GLRXP35754 106 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 EVX1P49640 407 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 VLDLRP98155 873 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 MYBPC1Q00872 1141 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 TAF11Q15544 211 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 ALG10Q5BKT4 473 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 ZNF584Q8IVC4 421 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 RNF113BQ8IZP6 322 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 MRPL24Q96A35 216 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 HSH2DQ96JZ2 352 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 NSRP1Q9H0G5 558 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 TXNIPQ9H3M7 391 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 SMURF2Q9HAU4 748 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 YAE1D1Q9NRH1 226 aa16.92■□□□□ 0.3
TSPAN4-209ENST00000409543 LOC390937A0A1W2PQ73 354 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 SNX3O60493 162 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 PRSS23O95084 383 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 ERCC1P07992 297 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 MAKP20794 623 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 DRD4P21917 467 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 LSP1P33241 339 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 GALK2Q01415 458 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 PRKCDQ05655 676 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 FXNQ16595 210 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 ANKDD1AQ495B1 522 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 SLC36A2Q495M3 483 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 C10orf128Q5T292 105 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 TMEM53Q6P2H8 277 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms