RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PAX6P26367 422 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 NPY4RP50391 375 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 OR52E1Q8NGJ3 308 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 CHAC2Q8WUX2 184 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 PATZ1Q9HBE1 687 aaKnown RBP16.26■□□□□ 0.19
SMPD4-202ENST00000409031 CACNA1CQ13936 2221 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 A0A1W2PP55 124 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 MBP02144 154 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 GLAP06280 429 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-202ENST00000409031 RIN1Q13671 783 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 CLLU1OSQ5K130 101 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 GOT1L1Q8NHS2 421 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-202ENST00000409031 RNF32Q9H0A6 362 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 PDFQ9HBH1 243 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF160Q9HCG1 818 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 UBQLN4Q9NRR5 601 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 HS3ST2Q9Y278 367 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 SERPINA7P05543 415 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 C5AR1P21730 350 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 RNLSQ5VYX0 342 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 PRSS35Q8N3Z0 413 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 METTL27Q8N6F8 245 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-202ENST00000409031 LINC01465Q8N7H1 131 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 DDIT4LQ96D03 193 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 DERL3Q96Q80 235 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 FBRSQ9HAH7 460 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 ENTPD2Q9Y5L3 495 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 LAMB1P07942 1786 aa16.26■□□□□ 0.19
SMPD4-202ENST00000409031 PPP5D1E7EU14 171 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 ADAMTS4O75173 837 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 OMGP23515 440 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 GABRR1P24046 479 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 H3F3AP84243 136 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 IRF3Q14653 427 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 LYG2Q86SG7 212 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 SCMH1Q96GD3 660 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 MMP26Q9NRE1 261 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 GAB2Q9UQC2 676 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 XRCC3O43542 346 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF354AO60765 605 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 THBS1P07996 1170 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 NAT2P11245 290 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 CDK5Q00535 292 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF836Q6ZNA1 936 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 GRASPQ7Z6J2 395 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 COMMD1Q8N668 190 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 EDAQ92838 391 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 OR52A4PA6NMU1 304 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 ATF1P18846 271 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 OR7A5Q15622 319 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 TAF9Q16594 264 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 EXOSC6Q5RKV6 272 aaKnown RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 PARS2Q7L3T8 475 aaKnown RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 SLC16A13Q7RTY0 426 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 TCEAL8Q8IYN2 117 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 SFT2D1Q8WV19 159 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 PTP4A1Q93096 173 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 ABHD1Q96SE0 405 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 BARHL1Q9BZE3 327 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 KCMF1Q9P0J7 381 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 SERTAD3Q9UJW9 196 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 MRPS28Q9Y2Q9 187 aaKnown RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 TMEM235A6NFC5 223 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 NME2P1O60361 137 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 CNOT4O95628 575 aaKnown RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 H2AFB1P0C5Y9 115 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 CXCL3P19876 107 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 CCNOP22674 350 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 TSFMP43897 325 aaKnown RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 PMPCAQ10713 525 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 TUSC1Q2TAM9 212 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF765Q7L2R6 523 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 OR13C8Q8NGS7 320 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 PFN4Q8NHR9 129 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 CPNE4Q96A23 557 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 C19orf43Q9BQ61 176 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 CMSS1Q9BQ75 279 aaKnown RBP16.25■□□□□ 0.19
SMPD4-202ENST00000409031 PCDHGA5Q9Y5G8 931 aa16.25■□□□□ 0.19
SMPD4-202ENST00000409031 SOCS7O14512 581 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 NID1P14543 1247 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF43P17038 809 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 TBPP20226 339 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 EPHA4P54764 986 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 SNRPNP63162 240 aaKnown RBP16.24■□□□□ 0.19
SMPD4-202ENST00000409031 CLINT1Q14677 625 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 STAC2Q6ZMT1 411 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 LRRTM1Q86UE6 522 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 SPTSSAQ969W0 71 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 CXorf58Q96LI9 332 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 PAPOLGQ9BWT3 736 aaKnown RBP16.24■□□□□ 0.19
SMPD4-202ENST00000409031 PARP12Q9H0J9 701 aaKnown RBP16.24■□□□□ 0.19
SMPD4-202ENST00000409031 ANKRD36CQ5JPF3 1778 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 PHOX2AO14813 284 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 FOLR1P15328 257 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 CSF2RAP15509 400 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 NFYBP25208 207 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 DOC2BQ14184 412 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 LTB4RQ15722 352 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 CNKSR3Q6P9H4 555 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms