RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TRMT10CQ7L0Y3 403 aaKnown RBP3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 GDPD3Q7L5L3 318 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 CDR2LQ86X02 465 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 NRMQ8IXM6 262 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 BBOF1Q8ND07 529 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 PPTC7Q8NI37 304 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 UBE2E3Q969T4 207 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 CXorf40BQ96DE9 158 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SNF8Q96H20 258 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SEC22AQ96IW7 307 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 ANKRD36BP1Q96IX9 119 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 IL4I1Q96RQ9 567 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCT8L2Q96SF2 557 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 CYP2S1Q96SQ9 504 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 IKZF5Q9H5V7 419 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 ASB7Q9H672 318 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 CYP3A43Q9HB55 503 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC2A8Q9NY64 477 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF639Q9UID6 485 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 IKZF2Q9UKS7 526 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 KIAA1257Q9ULG3 409 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 COL1A2P08123 1366 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 KIF26BQ2KJY2 2108 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 RBBP6Q7Z6E9 1792 aaKnown RBP3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 A0A1B0GUA9 196 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 A0A1B0GWB2 263 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 IDSB3KWA1 339 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 K7ENP7 123 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 NDUFAB1O14561 156 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 RGS16O15492 202 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 TRAPPC3O43617 180 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 TTC4O95801 387 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 FAM107AO95990 144 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 CXCL8P10145 99 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 HOXD10P28358 340 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 NTSP30990 170 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 LEPP41159 167 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 CDKN2BP42772 138 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 KIR2DS2P43631 304 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZFP36L1Q07352 338 aaKnown RBP3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 ASAH1Q13510 395 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 TRIP13Q15645 432 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 TIMM50Q3ZCQ8 353 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 TNFAIP8L3Q5GJ75 292 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 TFDP3Q5H9I0 405 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 PAGE2BQ5JRK9 111 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 MARCH8Q5T0T0 291 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 ARMC12Q5T9G4 340 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 RNLSQ5VYX0 342 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR2A2Q6IF42 318 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 DCUN1D2Q6PH85 259 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 SVOPLQ8N434 492 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR1L4Q8NGR5 311 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 RAPGEF5Q92565 580 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 FGGYQ96C11 551 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 FAF2Q96CS3 445 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 SERAC1Q96JX3 654 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 SERPINB12Q96P63 405 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 MCEEQ96PE7 176 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF670Q9BS34 389 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 FAM107BQ9H098 131 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 YY1AP1Q9H869 796 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 ISG20L2Q9H9L3 353 aaKnown RBP3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 MIEF1Q9NQG6 463 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 B3GNT2Q9NY97 397 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 ONECUT1Q9UBC0 465 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 GGA2Q9UJY4 613 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 ATAD5Q96QE3 1844 aa3.67□□□□□ -1.82
HMGB3P18-201ENST00000406327 RLFQ13129 1914 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 TCF20Q9UGU0 1960 aaKnown RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 hCG_1818297A0A087WSY0 165 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCL15-CCL14A0A0B4J2E2 113 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 IQANK1A0A1B0GTG1 560 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 HEATR9A2RTY3 570 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 BTBD17A6NE02 478 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 A8MXQ7 604 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 HAS3O00219 553 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ATP5LO75964 103 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 VENTXO95231 258 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 KRT7P08729 469 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF286BP0CG31 522 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 SFTPCP11686 197 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 NCK1P16333 377 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 POLR2EP19388 210 aaKnown RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 SHC1P29353 583 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 IL12AP29459 219 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLCO1A2P46721 670 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 LIM2P55344 173 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 PKNOX1P55347 436 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ERVPABLB-1P60509 514 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC25A11Q02978 314 aaKnown RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 INCA1Q0VD86 236 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 BST1Q10588 318 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 MRPL28Q13084 256 aaKnown RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ARL6IP1Q15041 203 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 RCN1Q15293 331 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZBTB6Q15916 424 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCL15Q16663 113 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 PTPN20Q4JDL3 420 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 SCARA5Q6ZMJ2 495 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms