RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ALPLP05186 524 aa25.81■■□□□ 1.72
USP42-202ENST00000404008 POU1F1P28069 291 aa25.81■■□□□ 1.72
USP42-202ENST00000404008 NOS3P29474 1203 aa25.81■■□□□ 1.72
USP42-202ENST00000404008 CD47Q08722 323 aa25.81■■□□□ 1.72
USP42-202ENST00000404008 CEACAM16Q2WEN9 425 aa25.81■■□□□ 1.72
USP42-202ENST00000404008 MCHR2Q969V1 340 aa25.81■■□□□ 1.72
USP42-202ENST00000404008 EME1Q96AY2 570 aa25.81■■□□□ 1.72
USP42-202ENST00000404008 PRSS37A4D1T9 235 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 H7C1C5 153 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 AHCYL1O43865 530 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 QDPRP09417 244 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 HIST1H1CP16403 213 aaKnown RBP25.8■■□□□ 1.72
USP42-202ENST00000404008 ALDH3A2P51648 485 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 ZNF133P52736 654 aaPredicted RBP25.8■■□□□ 1.72
USP42-202ENST00000404008 LCN6P62502 163 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 MYBPC1Q00872 1141 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 SLC27A4Q6P1M0 643 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 PTCHD4Q6ZW05 846 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 BHLHA15Q7RTS1 189 aaPredicted RBP25.8■■□□□ 1.72
USP42-202ENST00000404008 IQCF1Q8N6M8 205 aa25.8■■□□□ 1.72
USP42-202ENST00000404008 SLC22A23A1A5C7 686 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 NR2C1P13056 603 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 IL32P24001 234 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 CDKN2AP42771 156 aaKnown RBP25.79■■□□□ 1.72
USP42-202ENST00000404008 CRISP1P54107 249 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 SH3BGRP55822 239 aaPredicted RBP25.79■■□□□ 1.72
USP42-202ENST00000404008 ESRRGP62508 458 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 TGFBR3Q03167 851 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 STK11Q15831 433 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 PGGHGQ32M88 737 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 THEM4Q5T1C6 240 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 SLC35F1Q5T1Q4 408 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 ACBD4Q8NC06 268 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 STEAP2Q8NFT2 490 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 FNDC8Q8TC99 324 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 OR10A4Q9H209 315 aa25.79■■□□□ 1.72
USP42-202ENST00000404008 VSX1Q9NZR4 365 aaPredicted RBP25.79■■□□□ 1.72
USP42-202ENST00000404008 ICE1Q9Y2F5 2266 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 RAD51DO75771 328 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 GIPRP48546 466 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 FMODQ06828 376 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 SNTB1Q13884 538 aaKnown RBP25.78■■□□□ 1.72
USP42-202ENST00000404008 GINS1Q14691 196 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 TRIP10Q15642 601 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 GABRA6Q16445 453 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 ZBTB49Q6ZSB9 765 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 C1orf162Q8NEQ5 155 aaPredicted RBP25.78■■□□□ 1.72
USP42-202ENST00000404008 OR4K13Q8NH42 304 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 RBP7Q96R05 134 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 SLC29A1Q99808 456 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 ACTR6Q9GZN1 396 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 NKX1-2Q9UD57 310 aaPredicted RBP25.78■■□□□ 1.72
USP42-202ENST00000404008 ENOPH1Q9UHY7 261 aa25.78■■□□□ 1.72
USP42-202ENST00000404008 CIB4A0PJX0 185 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 ZNF99A8MXY4 864 aaPredicted RBP25.77■■□□□ 1.72
USP42-202ENST00000404008 SLC2A10O95528 541 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 CDH2P19022 906 aaPredicted RBP25.77■■□□□ 1.72
USP42-202ENST00000404008 PEX19P40855 299 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 CDK5Q00535 292 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 C10orf128Q5T292 105 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 JAZF1Q86VZ6 243 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 S100PBPQ96BU1 408 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 MUS81Q96NY9 551 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 SLC25A19Q9HC21 320 aa25.77■■□□□ 1.72
USP42-202ENST00000404008 IGKV1D-43A0A0B4J1Z2 117 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 DHHO43323 396 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 GRK5P34947 590 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 ARF1P84077 181 aaKnown RBP25.76■■□□□ 1.71
USP42-202ENST00000404008 KHDRBS1Q07666 443 aaKnown RBP eCLIP25.76■■□□□ 1.71
USP42-202ENST00000404008 ZNF362Q5T0B9 420 aaPredicted RBP25.76■■□□□ 1.71
USP42-202ENST00000404008 OR7E24Q6IFN5 339 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 ACSM5Q6NUN0 579 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 LEG1Q6P5S2 330 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 SLC25A47Q6Q0C1 308 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 DMRTC2Q8IXT2 367 aaPredicted RBP25.76■■□□□ 1.71
USP42-202ENST00000404008 SDR9C7Q8NEX9 313 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 OR52E2Q8NGJ4 325 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 OR1K1Q8NGR3 316 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 BOD1Q96IK1 185 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 SNX18Q96RF0 628 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 NMNAT3Q96T66 252 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 GABARAPL3Q9BY60 117 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 SYT4Q9H2B2 425 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 RNPEPL1Q9HAU8 725 aa25.76■■□□□ 1.71
USP42-202ENST00000404008 PTGES3Q15185 160 aaKnown RBP25.75■■□□□ 1.71
USP42-202ENST00000404008 TMEM236Q5W0B7 351 aa25.75■■□□□ 1.71
USP42-202ENST00000404008 USB1Q9BQ65 265 aaKnown RBP25.75■■□□□ 1.71
USP42-202ENST00000404008 RRP15Q9Y3B9 282 aaKnown RBP25.75■■□□□ 1.71
USP42-202ENST00000404008 ORC6Q9Y5N6 252 aa25.75■■□□□ 1.71
USP42-202ENST00000404008 CASQ2O14958 399 aaPredicted RBP25.74■■□□□ 1.71
USP42-202ENST00000404008 MGRN1O60291 552 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 PPP3CBP16298 524 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 PEX2P28328 305 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 EPHA2P29317 976 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 LPCAT4Q643R3 524 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 ANKRD16Q6P6B7 361 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 ZNF627Q7L945 461 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 NPEPL1Q8NDH3 523 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 NELFAQ9H3P2 528 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 PLEKHB1Q9UF11 243 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms