RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HOXC12P31275 282 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 RABIFP47224 123 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ACSM1Q08AH1 577 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 YIF1BQ5BJH7 314 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SLC25A30Q5SVS4 291 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 HACD4Q5VWC8 232 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR7E24Q6IFN5 339 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 DPY19L2P2Q6ZN68 376 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 HIST2H3AQ71DI3 136 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR2T27Q8NH04 317 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR4C3Q8NH37 302 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 MENTQ9BUN1 341 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 RAB9BQ9NP90 201 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF281Q9Y2X9 895 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TMED7Q9Y3B3 224 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 DOCK5Q9H7D0 1870 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 POM121CA8CG34 1229 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SLC22A5O76082 557 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 THBS1P07996 1170 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 UBL4AP11441 157 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SLC26A5P58743 744 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ST3GAL2Q16842 350 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 NKPD1Q17RQ9 610 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR5M10Q6IEU7 315 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR2T4Q8NH00 348 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 DUSP19Q8WTR2 217 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SDSLQ96GA7 329 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 COMMD9Q9P000 198 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF337Q9Y3M9 751 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 CCSO14618 274 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 RGS13O14921 159 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 HPXP02790 462 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ATP1B1P05026 303 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FXYD6P3P58550 94 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SPOCK1Q08629 439 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ACBD4Q8NC06 268 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR11H7Q8NGC8 314 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TRPV4Q9HBA0 871 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 KLK11Q9UBX7 282 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 CGGBP1Q9UFW8 167 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SLC23A1Q9UHI7 598 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ST6GALNAC2Q9UJ37 374 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FBXL3Q9UKT7 428 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 MAB21L2Q9Y586 359 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FREM1Q5H8C1 2179 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 P2RY10O00398 339 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 CYR61O00622 381 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF208O43345 1280 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 UBL3O95164 117 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 H2BFMP0C1H6 154 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 VPREB1P12018 145 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PRKACAP17612 351 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 BLKP51451 505 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ARHGDIBP52566 201 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 RAB11BQ15907 218 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 C14orf28Q4W4Y0 310 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SMIM15Q7Z3B0 74 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 NR2C2APQ86WQ0 139 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 GALNT6Q8NCL4 622 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 C16orf52Q8NHV5 167 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TNFAIP8L1Q8WVP5 186 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 RANBP3Q9H6Z4 567 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SEC61A2Q9H9S3 476 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SCPEP1Q9HB40 452 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 NPFFR2Q9Y5X5 522 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TRPM7Q96QT4 1865 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 KIR2DS5A0A0G2JLQ3 304 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 A0A0G2JNG1 304 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 A0A1B0GVI7 797 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 KIR2DS3K7RE56 304 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 WRBO00258 174 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 CRYZL1O95825 349 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 IFNA10P01566 189 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 IFNA4P05014 189 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PSMB1P20618 241 aaKnown RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PRKXP51817 358 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PSG6Q00889 435 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 KIR2DS5Q14953 304 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ALKAL2Q6UX46 152 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 LRRN1Q6UXK5 716 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SLC29A4Q7RTT9 530 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 LINC00346Q8IVM7 164 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TCTE3Q8IZS6 198 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 SYS1Q8N2H4 156 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 C12orf45Q8N5I9 185 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ABHD1Q96SE0 405 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 C7orf50Q9BRJ6 194 aaKnown RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 MCOLN1Q9GZU1 580 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 WDR76Q9H967 626 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 CYSLTR2Q9NS75 346 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FAM181BA6NEQ2 426 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ERVH48-1M5A8F1 160 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 AMY2AP04746 511 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF28P17035 718 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 GABRG2P18507 467 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 CDKN2AP42771 156 aaKnown RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PTH2RP49190 550 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TAS2R20P59543 309 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TOMM34Q15785 309 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 Q499Y3 187 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms