RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RNF13O43567 381 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 CELP19835 753 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 MAP2K6P52564 334 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 B3GALT5-AS1P59052 145 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TAS2R43P59537 309 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 LTBQ06643 244 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SELENBP1Q13228 472 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 C3orf33Q6P1S2 294 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SNX29P2Q8IUI4 249 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 Q8NA96 180 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 OR10H4Q8NGA5 316 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SMPDL3BQ92485 455 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 UBL7Q96S82 380 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-207ENST00000397200 DCLRE1CQ96SD1 692 aaKnown RBP13.35□□□□□ -0.27
CAPN3-207ENST00000397200 CCDC32Q9BV29 185 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 KATNB1Q9BVA0 655 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TSPAN10Q9H1Z9 355 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SLC6A15Q9H2J7 730 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 FKRPQ9H9S5 495 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TRIM36Q9NQ86 728 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 ZNF229Q9UJW7 825 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 ADAM18Q9Y3Q7 739 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 LINC01387J3KSC0 135 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TFP02787 698 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 MT-ND5P03915 603 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 CD14P08571 375 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 IL11P20809 199 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TNFSF8P32971 234 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SDC2P34741 201 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SLC25A1P53007 311 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 RPS7P62081 194 aaKnown RBP13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SPANXN2Q5MJ10 180 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TMEM91Q6ZNR0 172 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 OR4K13Q8NH42 304 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 MOSPD2Q8NHP6 518 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 DDIT4LQ96D03 193 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 MOGAT1Q96PD6 335 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SDHCQ99643 169 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-207ENST00000397200 KCNS3Q9BQ31 491 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SLC30A2Q9BRI3 323 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 EXO5Q9H790 373 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 NANSQ9NR45 359 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 SIRT4Q9Y6E7 314 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-207ENST00000397200 V9GYH0 126 aa13.35□□□□□ -0.27
CAPN3-207ENST00000397200 TRGV5A0A0B4J1U4 118 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 A8MVM7 634 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 NPIPA5E9PKD4 350 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 H3BML4 177 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 ZNF208O43345 1280 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 PLPP2O43688 288 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 EFNA2O43921 213 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 PFDN1O60925 122 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 GYPBP06028 91 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 MRPL3P09001 348 aaKnown RBP13.34□□□□□ -0.27
CAPN3-207ENST00000397200 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 OR2T7P0C7T2 308 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 FKBP2P26885 142 aaKnown RBP13.34□□□□□ -0.27
CAPN3-207ENST00000397200 RPL4P36578 427 aaKnown RBP13.34□□□□□ -0.27
CAPN3-207ENST00000397200 GFRA1P56159 465 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 RUNX1T1Q06455 604 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 LGALS3BPQ08380 585 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
CAPN3-207ENST00000397200 TRAM1Q15629 374 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 GXYLT1Q4G148 440 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 EMC4Q5J8M3 183 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 VASH1Q7L8A9 365 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-207ENST00000397200 SIAH3Q8IW03 269 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 SYS1Q8N2H4 156 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 OR2T27Q8NH04 317 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 SLC25A43Q8WUT9 341 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-207ENST00000397200 CNN2Q99439 309 aaKnown RBP13.34□□□□□ -0.27
CAPN3-207ENST00000397200 TMEM185BQ9H7F4 350 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 SP140LQ9H930 580 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 NPIPA1Q9UND3 350 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 LIPGQ9Y5X9 500 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 BOD1L1Q8NFC6 3051 aa13.34□□□□□ -0.27
CAPN3-207ENST00000397200 A0A1W2PQL4 384 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-207ENST00000397200 OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 GJE1A6NN92 205 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 TBX1O43435 398 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 NPIPB7O75200 414 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 SC5DO75845 299 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 RGS9O75916 674 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-207ENST00000397200 IGHG3P01860 377 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 BGLAPP02818 100 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 TFPIP10646 304 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 SPI1P17947 270 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 POU3F2P20265 443 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-207ENST00000397200 SFTPDP35247 375 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 AQP2P41181 271 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 DIO1P49895 249 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 RAC1P63000 192 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 STEAP3Q658P3 488 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 C5orf46Q6UWT4 87 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 TRILQ7L0X0 811 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 LAX1Q8IWV1 398 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 CISD2Q8N5K1 135 aaKnown RBP13.33□□□□□ -0.28
CAPN3-207ENST00000397200 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms