RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 ZNF3P17036 446 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 CRABP1P29762 137 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 GIPRP48546 466 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 GINS1Q14691 196 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 CDSNQ15517 529 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 PGGHGQ32M88 737 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 MESTQ5EB52 335 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 C1QTNF12Q5T7M4 302 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 PACRGLQ8N7B6 248 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 OR8D4Q8NGM9 314 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 HDAC2Q92769 488 aaKnown RBP18.78■□□□□ 0.6
FXN-202ENST00000396364 RASD2Q96D21 266 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 VCX3BQ9H321 246 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 CACNA1CQ13936 2221 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 FLNCQ14315 2725 aa18.78■□□□□ 0.6
FXN-202ENST00000396364 FREM1Q5H8C1 2179 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 MGRN1O60291 552 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 PAICSP22234 425 aaKnown RBP18.77■□□□□ 0.6
FXN-202ENST00000396364 IGHV1-2P23083 117 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 EDNRAP25101 427 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 UGT2B10P36537 528 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 TFF3Q07654 80 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 HIST3H3Q16695 136 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 CEACAM16Q2WEN9 425 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 LEG1Q6P5S2 330 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 STAC2Q6ZMT1 411 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 BHLHA15Q7RTS1 189 aaPredicted RBP18.77■□□□□ 0.6
FXN-202ENST00000396364 P2RY8Q86VZ1 359 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 C17orf78Q8N4C9 275 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 ZNF433Q8N7K0 673 aaPredicted RBP18.77■□□□□ 0.6
FXN-202ENST00000396364 OR52E2Q8NGJ4 325 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 MCHR2Q969V1 340 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 RDH12Q96NR8 316 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 GABARAPL3Q9BY60 117 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 RIBC2Q9H4K1 309 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 SLC25A19Q9HC21 320 aa18.77■□□□□ 0.6
FXN-202ENST00000396364 TMEFF2Q9UIK5 374 aaPredicted RBP18.77■□□□□ 0.6
FXN-202ENST00000396364 ZNF99A8MXY4 864 aaPredicted RBP18.76■□□□□ 0.59
FXN-202ENST00000396364 CASQ2O14958 399 aaPredicted RBP18.76■□□□□ 0.59
FXN-202ENST00000396364 DHHO43323 396 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 LYZL6O75951 148 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 HIST1H1CP16403 213 aaKnown RBP18.76■□□□□ 0.59
FXN-202ENST00000396364 PAX7P23759 505 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 CDK5Q00535 292 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 RUNX1T1Q06455 604 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.76■□□□□ 0.59
FXN-202ENST00000396364 FAM27E3Q08E93 113 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 NPRL3Q12980 569 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 PTGES3Q15185 160 aaKnown RBP18.76■□□□□ 0.59
FXN-202ENST00000396364 SLC35F1Q5T1Q4 408 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 ANKRD34AQ69YU3 496 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 KLHL24Q6TFL4 600 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 OR4K13Q8NH42 304 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 CMC2Q9NRP2 79 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 VSX1Q9NZR4 365 aaPredicted RBP18.76■□□□□ 0.59
FXN-202ENST00000396364 HELZ2Q9BYK8 2649 aaKnown RBP18.76■□□□□ 0.59
FXN-202ENST00000396364 HCFC1P51610 2035 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 DOPEY1Q5JWR5 2465 aa18.76■□□□□ 0.59
FXN-202ENST00000396364 SLC22A23A1A5C7 686 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 MITFO75030 526 aaPredicted RBP18.75■□□□□ 0.59
FXN-202ENST00000396364 FARS2O95363 451 aaKnown RBP18.75■□□□□ 0.59
FXN-202ENST00000396364 IGFBP1P08833 259 aaPredicted RBP18.75■□□□□ 0.59
FXN-202ENST00000396364 RNF224P0DH78 156 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 ZNF133P52736 654 aaPredicted RBP18.75■□□□□ 0.59
FXN-202ENST00000396364 LGALS3BPQ08380 585 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 C10orf128Q5T292 105 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 ANKRD16Q6P6B7 361 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 CCDC36Q8IYA8 594 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 OR4Q3Q8NH05 313 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 MUCL1Q96DR8 90 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 ACTR6Q9GZN1 396 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 SYT4Q9H2B2 425 aa18.75■□□□□ 0.59
FXN-202ENST00000396364 MOV10Q9HCE1 1003 aaKnown RBP18.75■□□□□ 0.59
FXN-202ENST00000396364 TUBAL3A6NHL2 446 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 RAD51DO75771 328 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 ITGA5P08648 1049 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 HOXB1P14653 301 aaPredicted RBP18.74■□□□□ 0.59
FXN-202ENST00000396364 NPR2P20594 1047 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 LRRC36Q1X8D7 754 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 NRN1LQ496H8 165 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 PHYHD1Q5SRE7 291 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 C9orf135Q5VTT2 229 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 LPCAT4Q643R3 524 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 IQCF1Q8N6M8 205 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 SDR9C7Q8NEX9 313 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 HSD17B8Q92506 261 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 NMNAT3Q96T66 252 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 FOXB1Q99853 325 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 MED18Q9BUE0 208 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 OBP2BQ9NPH6 170 aa18.74■□□□□ 0.59
FXN-202ENST00000396364 SMPD3Q9NY59 655 aaPredicted RBP18.74■□□□□ 0.59
FXN-202ENST00000396364 SPTBN1Q01082 2364 aaKnown RBP18.74■□□□□ 0.59
FXN-202ENST00000396364 H7C1C5 153 aa18.73■□□□□ 0.59
FXN-202ENST00000396364 KHDRBS3O75525 346 aaKnown RBP18.73■□□□□ 0.59
FXN-202ENST00000396364 ATP6V1G2O95670 118 aa18.73■□□□□ 0.59
FXN-202ENST00000396364 PEX2P28328 305 aa18.73■□□□□ 0.59
FXN-202ENST00000396364 CDKN2AP42771 156 aaKnown RBP18.73■□□□□ 0.59
FXN-202ENST00000396364 UBE2NP61088 152 aaKnown RBP18.73■□□□□ 0.59
FXN-202ENST00000396364 LCN6P62502 163 aa18.73■□□□□ 0.59
FXN-202ENST00000396364 ARF1P84077 181 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms