RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 GAREM1Q9H706 876 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 MED20Q9H944 212 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 OR52A1Q9UKL2 312 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 POLDIP2Q9Y2S7 368 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CSO75390 466 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CTXN2P0C2S0 81 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CALCBP10092 127 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 AADACP22760 399 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 PRPH2P23942 346 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GDNFP39905 211 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 FCRL6Q6DN72 434 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 B3GLCTQ6Y288 498 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CAMKMTQ7Z624 323 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CISD2Q8N5K1 135 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 OR52H1Q8NGJ2 320 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SLC25A46Q96AG3 418 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 NIPSNAP3BQ9BS92 247 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 C20orf27Q9GZN8 174 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 EGLN1Q9GZT9 426 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SPACA1Q9HBV2 294 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GNG13Q9P2W3 67 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 OSGIN1Q9UJX0 560 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SPTBP11277 2137 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 A0A1B0GWA3 101 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ACOD1A6NK06 481 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 FADS1O60427 444 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 PMS2P2O95744 297 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CRMP1Q14194 572 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 NKAIN2Q5VXU1 208 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 FAM111BQ6SJ93 734 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 MDGA2Q7Z553 956 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 MAML2Q8IZL2 1156 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 KIRREL1Q96J84 757 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ZDHHC5Q9C0B5 715 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SEMA4CQ9C0C4 833 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SLC39A9Q9NUM3 307 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF732B4DXR9 585 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 K7EQM0 130 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR8G3PP0DMU2 310 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A6P0DMU7 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A5P0DMU8 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A7P0DMV0 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A8P0DMV1 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A9P0DMV2 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 HNF4GQ14541 408 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 MEP1BQ16820 701 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A2Q5DJT8 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A1Q5HYN5 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GDF7Q7Z4P5 450 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF321PQ8N8H1 164 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CT45A3Q8NHU0 189 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 UTP4Q969X6 686 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ZPBPQ9BS86 351 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 C20orf85Q9H1P6 137 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GNG12Q9UBI6 72 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 NDRG4Q9ULP0 352 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 NKX6-3A6NJ46 265 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TNFSF12O43508 249 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GLB1P16278 677 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CPEP16870 476 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 BCL6P41182 706 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 RAB13P51153 203 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 NKAIN1Q4KMZ8 207 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SYT6Q5T7P8 510 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CST9Q5W186 159 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 HEPHL1Q6MZM0 1159 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GDPD3Q7L5L3 318 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 GPR155Q7Z3F1 870 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PIWIL3Q7Z3Z3 882 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR6M1Q8NGM8 313 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FOXN4Q96NZ1 517 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CSF3RQ99062 836 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 METTL17Q9H7H0 456 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 COL18A1P39060 1754 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 C7orf72A4D263 438 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ALOX12BO75342 701 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OR8U8P0C7N1 319 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 POU3F3P20264 500 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 NFYBP25208 207 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 MRPS34P82930 218 aaKnown RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 DMWDQ09019 674 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 RUNX2Q13950 521 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 LRRC26Q2I0M4 334 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TRIM61Q5EBN2 209 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 COX20Q5RI15 118 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SPPL3Q8TCT6 385 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF845Q96IR2 970 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 JAM3Q9BX67 310 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 FKRPQ9H9S5 495 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 RANGRFQ9HD47 186 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 OPN1LWP04000 364 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF77Q15935 545 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SHEQ5VZ18 495 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 SAXO2Q658L1 398 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 CREB3L2Q70SY1 520 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 DCXRQ7Z4W1 244 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 VRK3Q8IV63 474 aa5.02□□□□□ -1.61
VPS13C-204ENST00000395898 TCEAL2Q9H3H9 227 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-204ENST00000395898 PIGLQ9Y2B2 252 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms