RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 HAO1Q9UJM8 370 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 FBXL3Q9UKT7 428 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 TMED5Q9Y3A6 229 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 WDR45Q9Y484 360 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 USH1CQ9Y6N9 552 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 HERC2O95714 4834 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 LOC102725191A0A1B0GVB3 256 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 A8MVM7 634 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 SLC28A1O00337 649 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 LSM1O15116 133 aaKnown RBP11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 DHHO43323 396 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 PIP5K1CO60331 668 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 NPHS1O60500 1241 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 SCN2BO60939 215 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 MFN2O95140 757 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 TFPTP0C1Z6 253 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 FAM157BP0CG42 384 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 OR8G3PP0DMU2 310 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 SELENOVP59797 346 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 BPIFB3P59826 476 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 RPL38P63173 70 aaKnown RBP11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 MFSD13AQ14CX5 517 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 CHI3L2Q15782 390 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 SPDYE7PQ495Y7 208 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 C1orf140Q5VVS0 124 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 C6orf89Q6UWU4 347 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 LRRN1Q6UXK5 716 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 NHLRC1Q6VVB1 395 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 ZNF813Q6ZN06 617 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 C6orf120Q7Z4R8 191 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 LRRC28Q86X40 367 aaPredicted RBP11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 C20orf196Q8IYI0 205 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 SPICQ8N5J4 248 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 PIK3C3Q8NEB9 887 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 FAM71F1Q96KD3 344 aaPredicted RBP11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 OXGR1Q96P68 337 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 TAPBPLQ9BX59 468 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 TCF7L2Q9NQB0 619 aa11.44□□□□□ -0.58
VCPKMT-201ENST00000395859 GPR37O15354 613 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 HNRNPCL1O60812 293 aaKnown RBP11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 ATP5HO75947 161 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 SNAP29O95721 258 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 RAB36O95755 333 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 MT-ND5P03915 603 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 B4GALT1P15291 398 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 ZNF43P17038 809 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 FUT4P22083 530 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 RPS4Y1P22090 263 aaKnown RBP11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 CXCR1P25024 350 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 ZNF81P51508 661 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 AQP5P55064 265 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 EGR4Q05215 589 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 BST1Q10588 318 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 LSM12Q3MHD2 195 aaKnown RBP11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 C16orf62Q7Z3J2 963 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 CLEC4FQ8N1N0 589 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 NATD1Q8N6N6 113 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 MFSD8Q8NHS3 518 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 SSMEM1Q8WWF3 244 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 ROPN1LQ96C74 230 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 NEURL3Q96EH8 262 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 LRR1Q96L50 414 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 SIGLEC11Q96RL6 698 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 ELAC2Q9BQ52 826 aaKnown RBP11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 OR51I1Q9H343 314 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 EXD2Q9NVH0 621 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 OR5V1Q9UGF6 321 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 PRDM4Q9UKN5 801 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 GPR45Q9Y5Y3 372 aa11.43□□□□□ -0.58
VCPKMT-201ENST00000395859 IGHV2-70DA0A0C4DH43 119 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 CFAP73A6NFT4 308 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 ZSCAN5BA6NJL1 495 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 K7EIL1 84 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 M0R3G1 203 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 TPD52L2O43399 206 aaKnown RBP11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 TSPAN9O75954 239 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 UBL3O95164 117 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 CHEK2O96017 543 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 CD55P08174 381 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 SBK2P0C263 348 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 PATE4P0C8F1 98 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 BGNP21810 368 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 HPCAL1P37235 193 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 ACAA2P42765 397 aaKnown RBP11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 SLC1A6P48664 564 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 ABCE1P61221 599 aaKnown RBP11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 ZMYND11Q15326 602 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 CLEC6AQ6EIG7 209 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 RIMKLAQ8IXN7 391 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 KLHL36Q8N4N3 616 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 ZNF283Q8N7M2 679 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 C11orf40Q8WZ69 217 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 SLC47A1Q96FL8 570 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 PRPF18Q99633 342 aaKnown RBP11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 MECRQ9BV79 373 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 CSMD3Q7Z407 3707 aa11.42□□□□□ -0.58
VCPKMT-201ENST00000395859 AZIN1O14977 448 aa11.41□□□□□ -0.58
VCPKMT-201ENST00000395859 PPP1R3DO95685 299 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms