RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 MT-ND2P03891 347 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 FCGR2AP12318 317 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 PYCR1P32322 319 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 MVKQ03426 396 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 CAMK2DQ13557 499 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 IRF3Q14653 427 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 THEM4Q5T1C6 240 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 RNLSQ5VYX0 342 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 PLXDC2Q6UX71 529 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 SPARTQ8N0X7 666 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 SYT14Q8NB59 555 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 FNDC8Q8TC99 324 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 JAM3Q9BX67 310 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 CDCA4Q9BXL8 241 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 MARCH7Q9H992 704 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 ADGRL4Q9HBW9 690 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 SRA1Q9HD15 236 aaKnown RBP13.41□□□□□ -0.26
PTPN20-206ENST00000395722 EMC3Q9P0I2 261 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 DIMT1Q9UNQ2 313 aaKnown RBP13.41□□□□□ -0.26
PTPN20-206ENST00000395722 PCDHGB1Q9Y5G3 927 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 ATMQ13315 3056 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 CRABP1P29762 137 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 C21orf33P30042 268 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-206ENST00000395722 PTGS2P35354 604 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 CENPAP49450 140 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
PTPN20-206ENST00000395722 BLMHQ13867 455 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 ACSF3Q4G176 576 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-206ENST00000395722 GTF2IRD2BQ6EKJ0 949 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 TMEM154Q6P9G4 183 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 B3GLCTQ6Y288 498 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 GTF2IRD2Q86UP8 949 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 OR51L1Q8NGJ5 315 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 ZMYND19Q96E35 227 aaPredicted RBP13.41□□□□□ -0.26
PTPN20-206ENST00000395722 WBP1Q96G27 269 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 TMEM80Q96HE8 168 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 PRRG4Q9BZD6 226 aa13.41□□□□□ -0.26
PTPN20-206ENST00000395722 IGKV1D-43A0A0B4J1Z2 117 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 SLC16A7O60669 478 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 IGHA1P01876 353 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 SBK2P0C263 348 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 DCKP27707 260 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 SELENOPP49908 381 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 CLRN1P58418 232 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 FMODQ06828 376 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 POU4F2Q12837 409 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 PRR30Q53SZ7 412 aaPredicted RBP13.4□□□□□ -0.26
PTPN20-206ENST00000395722 DNM1P34Q6PK57 102 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 SLC25A47Q6Q0C1 308 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 C20orf196Q8IYI0 205 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 STX19Q8N4C7 294 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 POMGNT2Q8NAT1 580 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 PROKR2Q8NFJ6 384 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 OR4F15Q8NGB8 312 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 OR5M9Q8NGP3 310 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 INTS12Q96CB8 462 aaKnown RBP13.4□□□□□ -0.26
PTPN20-206ENST00000395722 RBP7Q96R05 134 aa13.4□□□□□ -0.26
PTPN20-206ENST00000395722 CD8B2A6NJW9 211 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 RAB36O95755 333 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 FADS2O95864 444 aaKnown RBP13.4□□□□□ -0.27
PTPN20-206ENST00000395722 YES1P07947 543 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 NR2C1P13056 603 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 PCMT1P22061 227 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 CSNK1A1P48729 337 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 LRFN4Q6PJG9 635 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 AAED1Q7RTV5 226 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 OR51G2Q8NGK0 314 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 WNT2BQ93097 391 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 CALHM2Q9HA72 323 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 ASF1BQ9NVP2 202 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 GLTPQ9NZD2 209 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 ITPR1Q14643 2758 aa13.4□□□□□ -0.27
PTPN20-206ENST00000395722 GTF3C1Q12789 2109 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 KHDRBS3O75525 346 aaKnown RBP13.39□□□□□ -0.27
PTPN20-206ENST00000395722 APOL3O95236 402 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 TFAP2AP05549 437 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 ATP6V1B1P15313 513 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 PTGER4P35408 488 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 BLVRAP53004 296 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 SF3B4Q15427 424 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTPN20-206ENST00000395722 GUSBP1Q15486 140 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 ETFDHQ16134 617 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 C10orf128Q5T292 105 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 CARD17Q5XLA6 110 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 NSUN5P2Q63ZY6 315 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 TUSC5Q8IXB3 177 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 TIGD4Q8IY51 512 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 OR6K6Q8NGW6 343 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 FAM57AQ8TBR7 257 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 MCHR2Q969V1 340 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 ZNF775Q96BV0 537 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-206ENST00000395722 ZNF649Q9BS31 505 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 GLRX2Q9NS18 164 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 SNX5Q9Y5X3 404 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 SVILO95425 2214 aa13.39□□□□□ -0.27
PTPN20-206ENST00000395722 USP24Q9UPU5 2620 aa13.38□□□□□ -0.27
PTPN20-206ENST00000395722 FAM171A2A8MVW0 826 aa13.38□□□□□ -0.27
PTPN20-206ENST00000395722 WDR1O75083 606 aa13.38□□□□□ -0.27
PTPN20-206ENST00000395722 SS18L1O75177 396 aaPredicted RBP13.38□□□□□ -0.27
PTPN20-206ENST00000395722 SLC43A1O75387 559 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms