RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PUSL1Q8N0Z8 303 aaKnown RBP13.01□□□□□ -0.33
CLIP2-203ENST00000395060 CMSS1Q9BQ75 279 aaKnown RBP13.01□□□□□ -0.33
CLIP2-203ENST00000395060 PELOQ9BRX2 385 aaKnown RBP13.01□□□□□ -0.33
CLIP2-203ENST00000395060 TMPRSS13Q9BYE2 586 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 PITHD1Q9GZP4 211 aaPredicted RBP13.01□□□□□ -0.33
CLIP2-203ENST00000395060 DNAJB12Q9NXW2 375 aaKnown RBP13.01□□□□□ -0.33
CLIP2-203ENST00000395060 CYB5R1Q9UHQ9 305 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 GLS2Q9UI32 602 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 TMEM82A0PJX8 343 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 OR6C65A6NJZ3 312 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 HMSDA8MTL9 139 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
CLIP2-203ENST00000395060 HCRTR1O43613 425 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 RDH16O75452 317 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 RAB3DO95716 219 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 AKAIN1P0CW23 69 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 BDKRB2P30411 391 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 DLSTP36957 453 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 PDGFRLQ15198 375 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 NR0B2Q15466 257 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 C2orf76Q3KRA6 126 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 MYADMQ96S97 322 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 KLHDC3Q9BQ90 382 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 TBC1D3DA0A087WVF3 549 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 TBC1D3IA0A087WXS9 549 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 A0A1W2PQU0 124 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 POM121BA6NF01 834 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 CSTAP01040 98 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
CLIP2-203ENST00000395060 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 NAT2P11245 290 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 PBX2P40425 430 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 ACTR1BP42025 376 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 ACTR1AP61163 376 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 PPP1CAP62136 330 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 SLC22A6Q4U2R8 563 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 MANEAQ5SRI9 462 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 AGBL4Q5VU57 503 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 TMEM71Q6P5X7 295 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 ENPP7Q6UWV6 458 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 MDGA2Q7Z553 956 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
CLIP2-203ENST00000395060 SLC2A12Q8TD20 617 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 PRR13Q9NZ81 148 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 ICAM5Q9UMF0 924 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 OR6C76A6NM76 312 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 OR2AT4A6NND4 320 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 NDUFA2O43678 99 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 GPRIN2O60269 458 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 AKR7A3O95154 331 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 FARS2O95363 451 aaKnown RBP13□□□□□ -0.33
CLIP2-203ENST00000395060 PVALBP20472 110 aaPredicted RBP13□□□□□ -0.33
CLIP2-203ENST00000395060 KCNJ3P48549 501 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 IL10RAQ13651 578 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 ZNF425Q6IV72 752 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 C3orf33Q6P1S2 294 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 FAM46BQ96A09 425 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
CLIP2-203ENST00000395060 SYT4Q9H2B2 425 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 COMMD9Q9P000 198 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 KCNG2Q9UJ96 466 aa13□□□□□ -0.33
CLIP2-203ENST00000395060 ARHGEF17Q96PE2 2063 aaPredicted RBP13□□□□□ -0.33
CLIP2-203ENST00000395060 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
CLIP2-203ENST00000395060 AGPAT2O15120 278 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 XRCC3O43542 346 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 ZNF254O75437 659 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 DCNP07585 359 aaKnown RBP12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CNR1P21554 472 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 AKR1C3P42330 323 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 DMRTC1Q5HYR2 192 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 NAXDQ8IW45 347 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 PPP1R1CQ8WVI7 109 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CCDC74AQ96AQ1 378 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CMBLQ96DG6 245 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 FBXO17Q96EF6 278 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 TMEM235A6NFC5 223 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CA3P07451 260 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 NFYBP25208 207 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CEBPEQ15744 281 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CST6Q15828 149 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 LDLRAD3Q86YD5 345 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 GABRG1Q8N1C3 465 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 ACBD4Q8NC06 268 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 OR6K3Q8NGY3 331 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CMKLR1Q99788 373 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 ESRP2Q9H6T0 727 aaKnown RBP12.99□□□□□ -0.33
CLIP2-203ENST00000395060 TREM1Q9NP99 234 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 SERTAD3Q9UJW9 196 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 SLC22A7Q9Y694 548 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 CXorf51AA0A1B0GTR3 108 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 F8W036 122 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 H0YGG7 62 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 UPK3AO75631 287 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 FGF19O95750 216 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 AKR1C4P17516 323 aa12.99□□□□□ -0.33
CLIP2-203ENST00000395060 PSMD4P55036 377 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms