RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CD79BP40259 229 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 MRPS34P82930 218 aaKnown RBP11.68□□□□□ -0.54
USP44-202ENST00000393091 RUNX1T1Q06455 604 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 GINS1Q14691 196 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 TSPO2Q5TGU0 170 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 NIPAL3Q6P499 406 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 PTCHD4Q6ZW05 846 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 SYT9Q86SS6 491 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 MEX3DQ86XN8 651 aaKnown RBP11.68□□□□□ -0.54
USP44-202ENST00000393091 PRR7Q8TB68 274 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 TMEM163Q8TC26 289 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 NABP1Q96AH0 204 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 Q96M85 177 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 ERMAPQ96PL5 475 aaPredicted RBP11.68□□□□□ -0.54
USP44-202ENST00000393091 IFT27Q9BW83 186 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 SLC7A10Q9NS82 523 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 MRPS18AQ9NVS2 196 aaKnown RBP11.68□□□□□ -0.54
USP44-202ENST00000393091 MED29Q9NX70 200 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 ADAM18Q9Y3Q7 739 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 GAAP10253 952 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 POU2F1P14859 743 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 PTNP21246 168 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 CSNK1A1P48729 337 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 MYBPC1Q00872 1141 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 ZNF691Q5VV52 312 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 ANKRD16Q6P6B7 361 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 PLXDC2Q6UX71 529 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 GPAT4Q86UL3 456 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 MCHR2Q969V1 340 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 NELFAQ9H3P2 528 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 TAS2R16Q9NYV7 291 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 ZNF99A8MXY4 864 aaPredicted RBP11.67□□□□□ -0.54
USP44-202ENST00000393091 C11orf98E9PRG8 122 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 IGFBP1P08833 259 aaPredicted RBP11.67□□□□□ -0.54
USP44-202ENST00000393091 EPXP11678 715 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 VHLP40337 213 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 SFRP5Q5T4F7 317 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 AADACL4Q5VUY2 407 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 TTC23Q5W5X9 447 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 OR7E24Q6IFN5 339 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 FJX1Q86VR8 437 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 ZNF610Q8N9Z0 462 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 BCL2L2Q92843 193 aaPredicted RBP11.67□□□□□ -0.54
USP44-202ENST00000393091 JAM3Q9BX67 310 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 CNTRLQ7Z7A1 2325 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 IGHV1-2P23083 117 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 AHCYP23526 432 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 RPL4P36578 427 aaKnown RBP11.67□□□□□ -0.54
USP44-202ENST00000393091 LSM6P62312 80 aaKnown RBP11.67□□□□□ -0.54
USP44-202ENST00000393091 DNM1P34Q6PK57 102 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 CASP12Q6UXS9 341 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 CCDC71Q8IV32 467 aaPredicted RBP11.67□□□□□ -0.54
USP44-202ENST00000393091 KDM8Q8N371 416 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 OR8J1Q8NGP2 316 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 SLC38A2Q96QD8 506 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 ATPIF1Q9UII2 106 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 LOC100130705A0A1B0GUX0 176 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 UPK3AO75631 287 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 EDNRAP25101 427 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 GABRA6Q16445 453 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 MEDAGQ5VYS4 303 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 NXNL2Q5VZ03 156 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 SEZ6L2Q6UXD5 910 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 ZNF100Q8IYN0 542 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 GPR137CQ8N3F9 429 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 LRRC46Q96FV0 321 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 SPOCK3Q9BQ16 436 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 ASB6Q9NWX5 421 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 PRSS50Q9UI38 385 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 RAB26Q9ULW5 256 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 ATRXP46100 2492 aa11.67□□□□□ -0.54
USP44-202ENST00000393091 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 DHHO43323 396 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 ICMTO60725 284 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 SNAP29O95721 258 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 RENP00797 406 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 ZNF3P17036 446 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 CAPGP40121 348 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 KRTAP27-1Q3LI81 207 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 STEAP2Q8NFT2 490 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 RASD2Q96D21 266 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 TMEM38BQ9NVV0 291 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 B3GNT2Q9NY97 397 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 POLEQ07864 2286 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 OR6C68A6NDL8 312 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 XKRYO14609 159 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 UGT2B10P36537 528 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 CLRN1P58418 232 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 LINC01590Q5TEZ4 76 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 FAM27BQ5VT28 67 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 RHOUQ7L0Q8 258 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 GCNT2Q8N0V5 402 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 RHOXF1Q8NHV9 184 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 SSC4DQ8WTU2 575 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 PTP4A1Q93096 173 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms