RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CTRCQ99895 268 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 PDFQ9HBH1 243 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CMC2Q9NRP2 79 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 THAP10Q9P2Z0 257 aaPredicted RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 RAB19A4D1S5 217 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 FITM1A5D6W6 292 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 ARGFXA6NJG6 315 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TPPPO94811 219 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TM4SF4P48230 202 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 ZNF74Q16587 644 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 PAPD4Q6PIY7 484 aaKnown RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 ZFP82Q8N141 532 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TEX19Q8NA77 164 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 RHBDD1Q8TEB9 315 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TSSK2Q96PF2 358 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CCNL2Q96S94 520 aaPredicted RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 MAP3K3Q99759 626 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 DAPP1Q9UN19 280 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CHST2Q9Y4C5 530 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 MMACHCQ9Y4U1 282 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 A0A1W2PR48 441 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 PLSCR5A0PG75 271 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 TMEM200CA6NKL6 621 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 TMPRSS11DO60235 418 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 THBS1P07996 1170 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 GIPP09681 153 aaPredicted RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 KITLGP21583 273 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 CXCL12P48061 93 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 LIM2P55344 173 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 GABREP78334 506 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 TLE4Q04727 773 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 IKZF1Q13422 519 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 PLGLAQ15195 96 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 NR0B2Q15466 257 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 MANEAQ5SRI9 462 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 YOD1Q5VVQ6 348 aaPredicted RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 KCNIP4Q6PIL6 250 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 TMUB2Q71RG4 321 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 TMEM179BQ7Z7N9 219 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 SEMA6CQ9H3T2 930 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 C19orf53Q9UNZ5 99 aaPredicted RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 SCRG1O75711 98 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 IGFBP6P24592 240 aaPredicted RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 TPMTP51580 245 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 MZT1Q08AG7 82 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 AQP6Q13520 282 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 ANGPTL5Q86XS5 388 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 HSD17B8Q92506 261 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 KIR3DX1Q9H7L2 352 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 OBP2BQ9NPH6 170 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 FGF21Q9NSA1 209 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 ACOXLQ9NUZ1 547 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 CGGBP1Q9UFW8 167 aaPredicted RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 OR14J1Q9UGF5 321 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 RNF212BA8MTL3 300 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 CALCBP10092 127 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 CD53P19397 219 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 MRPL19P49406 292 aaKnown RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 VEGFBP49765 207 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 DGCR2P98153 550 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 CDC20Q12834 499 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 CAMK2BQ13554 666 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 CST9LP1Q5W188 147 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 ZBP1Q9H171 429 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 LYRM4Q9HD34 91 aa12.07□□□□□ -0.48
LCA5-202ENST00000392959 BOKQ9UMX3 212 aaPredicted RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 PTPRZ1P23471 2315 aaPredicted RBP12.07□□□□□ -0.48
LCA5-202ENST00000392959 SULT1C4O75897 302 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 PMP2P02689 132 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 EPHA5P54756 1037 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 HBG1P69891 147 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 HBG2P69892 147 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 TAGLNQ01995 201 aaKnown RBP12.06□□□□□ -0.48
LCA5-202ENST00000392959 CLINT1Q14677 625 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 LYSMD4Q5XG99 296 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 RBMS3Q6XE24 437 aaKnown RBP12.06□□□□□ -0.48
LCA5-202ENST00000392959 KANSL1Q7Z3B3 1105 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 ISYNA1Q9NPH2 558 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 TMEM184BQ9Y519 407 aaPredicted RBP12.06□□□□□ -0.48
LCA5-202ENST00000392959 RGPD5Q99666 1765 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 K7ESM1 405 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 MT-ATP6P00846 226 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 RAF1P04049 648 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 EPHA2P29317 976 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 SERPINF1P36955 418 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 EVX1P49640 407 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 NPY4RP50391 375 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 DEFA6Q01524 100 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 PMPCAQ10713 525 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 ZNF266Q14584 549 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 C1orf140Q5VVS0 124 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 FAHD1Q6P587 224 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 GLIPR1L1Q6UWM5 242 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 FAM174AQ8TBP5 190 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 MSI2Q96DH6 328 aaKnown RBP12.06□□□□□ -0.48
LCA5-202ENST00000392959 SLC35A4Q96G79 324 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 OPALINQ96PE5 141 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 SGPP1Q9BX95 441 aa12.06□□□□□ -0.48
LCA5-202ENST00000392959 SLAMF7Q9NQ25 335 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms