RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 TUBAL3A6NHL2 446 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 QDPRP09417 244 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 PPP3CBP16298 524 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 POU1F1P28069 291 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 CCKARP32238 428 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 SH3BGRP55822 239 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-203ENST00000392246 PPP2R2BQ00005 443 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 CD47Q08722 323 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 TSC22D1Q15714 1073 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 STK11Q15831 433 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 MESTQ5EB52 335 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-203ENST00000392246 DMRTC2Q8IXT2 367 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-203ENST00000392246 LNX2Q8N448 690 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 ACBD4Q8NC06 268 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 C1orf162Q8NEQ5 155 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-203ENST00000392246 MUS81Q96NY9 551 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 SPOCK3Q9BQ16 436 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 ACTR6Q9GZN1 396 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 DCLRE1BQ9H816 532 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 PLEKHB1Q9UF11 243 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-203ENST00000392246 ENOPH1Q9UHY7 261 aa13.12□□□□□ -0.31
SUMO1-203ENST00000392246 SPTAN1Q13813 2472 aaKnown RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 ADGRG4Q8IZF6 3080 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 ZNF99A8MXY4 864 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 DHHO43323 396 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 RAD51DO75771 328 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 HIST1H1CP16403 213 aaKnown RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 CDH2P19022 906 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 IGFBP5P24593 272 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 GIPRP48546 466 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 ZNF133P52736 654 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 ESRRGP62508 458 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 SNTB1Q13884 538 aaKnown RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 DAG1Q14118 895 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 GABRA6Q16445 453 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 SLC27A4Q6P1M0 643 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 P2RY8Q86VZ1 359 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 OR4K13Q8NH42 304 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 EME1Q96AY2 570 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 S100PBPQ96BU1 408 aa13.11□□□□□ -0.31
SUMO1-203ENST00000392246 NMD3Q96D46 503 aaKnown RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 ZNF837Q96EG3 531 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 TMEFF2Q9UIK5 374 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-203ENST00000392246 USP9YO00507 2555 aaPredicted RBP13.1□□□□□ -0.31
SUMO1-203ENST00000392246 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 H7C1C5 153 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 EI24O14681 340 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 MITFO75030 526 aaPredicted RBP13.1□□□□□ -0.31
SUMO1-203ENST00000392246 ALPLP05186 524 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 CDKN2AP42771 156 aaKnown RBP13.1□□□□□ -0.31
SUMO1-203ENST00000392246 KIR2DL3P43628 341 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 CRISP1P54107 249 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 LCN6P62502 163 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 ARF1P84077 181 aaKnown RBP13.1□□□□□ -0.31
SUMO1-203ENST00000392246 CDK5Q00535 292 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 GINS1Q14691 196 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 PGGHGQ32M88 737 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 C10orf128Q5T292 105 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 MEX3BQ6ZN04 569 aaKnown RBP13.1□□□□□ -0.31
SUMO1-203ENST00000392246 ZBTB49Q6ZSB9 765 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 PTCHD4Q6ZW05 846 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 C17orf78Q8N4C9 275 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 CBR4Q8N4T8 237 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 OR52E2Q8NGJ4 325 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 OR1K1Q8NGR3 316 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 BOD1Q96IK1 185 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 WFIKKN1Q96NZ8 548 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 SNX18Q96RF0 628 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 MED18Q9BUE0 208 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 TEX12Q9BXU0 123 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
SUMO1-203ENST00000392246 ORC6Q9Y5N6 252 aa13.1□□□□□ -0.31
SUMO1-203ENST00000392246 SH3D21A4FU49 640 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 RENP00797 406 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 GRK5P34947 590 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 ZNF84P51523 738 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 FMODQ06828 376 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.09□□□□□ -0.31
SUMO1-203ENST00000392246 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 LEG1Q6P5S2 330 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 ANKRD16Q6P6B7 361 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 SLC25A47Q6Q0C1 308 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 IQCF1Q8N6M8 205 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 HSD17B8Q92506 261 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 DACH2Q96NX9 599 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 NMNAT3Q96T66 252 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 FOXB1Q99853 325 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 SYT4Q9H2B2 425 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 KLHL21Q9UJP4 597 aa13.09□□□□□ -0.31
SUMO1-203ENST00000392246 IGKV1D-43A0A0B4J1Z2 117 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 OR5H1A6NKK0 313 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms