RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 STK17BO94768 372 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 GNRH1P01148 92 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 NID1P14543 1247 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 MEOX2P50222 304 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 SNRPNP63162 240 aaKnown RBP13.07□□□□□ -0.32
RTF1-201ENST00000389629 SLC22A6Q4U2R8 563 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 AADACL4Q5VUY2 407 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 ELF4Q99607 663 aaPredicted RBP13.07□□□□□ -0.32
RTF1-201ENST00000389629 HIF3AQ9Y2N7 669 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 PIKFYVEQ9Y2I7 2098 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 K7EPK0 472 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 C5AR1P21730 350 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
RTF1-201ENST00000389629 EMP2P54851 167 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 ZNF273Q14593 569 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 CD300LDQ6UXZ3 194 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 FAM71E2Q8N5Q1 922 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 NPAS1Q99742 590 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 SLC5A7Q9GZV3 580 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 GPR160Q9UJ42 338 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 TMEM235A6NFC5 223 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 SIGLEC6O43699 453 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 SLC34A2O95436 690 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 PMP2P02689 132 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 GLP1RP43220 463 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 PCBP4P57723 403 aaKnown RBP13.07□□□□□ -0.32
RTF1-201ENST00000389629 PLA2G7Q13093 441 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 KIAA0141Q14154 515 aaPredicted RBP13.07□□□□□ -0.32
RTF1-201ENST00000389629 FAM71CQ8NEG0 241 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 OR4K15Q8NH41 348 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 PHYHIPQ92561 330 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 DIO2Q92813 273 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 CHRDQ9H2X0 955 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 RAG2P55895 527 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 MEP1BQ16820 701 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 SEZ6L2Q6UXD5 910 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 TMEM91Q6ZNR0 172 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 COMTD1Q86VU5 262 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 SMARCD2Q92925 531 aa13.07□□□□□ -0.32
RTF1-201ENST00000389629 A0A0A6YYC8 382 aaPredicted RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 I3L1I5 382 aaPredicted RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 TLX3O43711 291 aaPredicted RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 CCL5P13501 91 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 GNRHRP30968 328 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 ACY1Q03154 408 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 EEF1A2Q05639 463 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 GPR157Q5UAW9 335 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 ZNF770Q6IQ21 691 aaPredicted RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 PCDHGA9Q9Y5G4 932 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 NDUFB6O95139 128 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
RTF1-201ENST00000389629 CALCBP10092 127 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 GABRA1P14867 456 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 CD53P19397 219 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 NPY4RP50391 375 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 ADAMTSL4Q6UY14 1074 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 STAC2Q6ZMT1 411 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 ZNF793Q6ZN11 406 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 OR2W3Q7Z3T1 314 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 MORN4Q8NDC4 146 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 SLC2A12Q8TD20 617 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 FBRSQ9HAH7 460 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 PURGQ9UJV8 347 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 LOC100289279A0A1B0GTE1 492 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 TMEM269A0A1B0GVZ9 245 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 H7C1Q1 480 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 NQO2P16083 231 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 AGFG1P52594 562 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 CRYBA2P53672 197 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 ERV3-1Q14264 604 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 KCNAB1Q14722 419 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 ZNF440Q8IYI8 595 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 OR51T1Q8NGJ9 327 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 LDAHQ9H6V9 325 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 UNKLQ9H9P5 680 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 MBNL1Q9NR56 388 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 ALPK2Q86TB3 2170 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 OR13C7P0DN81 318 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 BATFQ16520 125 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 LAMTOR1Q6IAA8 161 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 MAMDC2Q7Z304 686 aaPredicted RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 TSEN54Q7Z6J9 526 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 SGPP2Q8IWX5 399 aa13.06□□□□□ -0.32
RTF1-201ENST00000389629 THAP3Q8WTV1 239 aaPredicted RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 USB1Q9BQ65 265 aaKnown RBP13.06□□□□□ -0.32
RTF1-201ENST00000389629 C7orf66A4D0T2 115 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 H0YGG7 62 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 CDC42EP2O14613 210 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 CHATP28329 748 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 IDH3GP51553 393 aaPredicted RBP13.05□□□□□ -0.32
RTF1-201ENST00000389629 ARF3P61204 181 aaPredicted RBP13.05□□□□□ -0.32
RTF1-201ENST00000389629 RUNX3Q13761 415 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms