RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TMEM52Q8NDY8 209 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 CSNK2A3Q8NEV1 391 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 GJC3Q8NFK1 279 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 ZFAND2BQ8WV99 257 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 KTI12Q96EK9 354 aaPredicted RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 TXNL4BQ9NX01 149 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 SIRT5Q9NXA8 310 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 CYR61O00622 381 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 FOXS1O43638 330 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 GSTT2P0CG29 244 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 TMEM205Q6UW68 189 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 SLC16A9Q7RTY1 509 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 OR2Y1Q8NGV0 311 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 MNTQ99583 582 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 GABARAPL3Q9BY60 117 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 ING1Q9UK53 422 aaPredicted RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 TNFSF11O14788 317 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 HYAL3O43820 417 aaPredicted RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 HRGP04196 525 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 TNFSF8P32971 234 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 ETV5P41161 510 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 ETV1P50549 477 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 MTCP1P56278 107 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 SLC35D3Q5M8T2 416 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 B3GNTL1Q67FW5 361 aaPredicted RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 SARAFQ96BY9 339 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 PRRX2Q99811 253 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 PLA2G12AQ9BZM1 189 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 NOX4Q9NPH5 578 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 DNAJB6O75190 326 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 DIRAS3O95661 229 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 TEKQ02763 1124 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 FAPQ12884 760 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 MAB21L1Q13394 359 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 ALKBH1Q13686 389 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 SSPNQ14714 243 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 CNN3Q15417 329 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 Q499Y3 187 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 GALNT11Q8NCW6 608 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 ST6GALNAC5Q9BVH7 336 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 NUDT15Q9NV35 164 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 KLK4Q9Y5K2 254 aa11.92□□□□□ -0.5
PTPRN2-202ENST00000389416 A0A087WUJ7 227 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 ISPDA4D126 451 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 PRRG2O14669 202 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 LCN1P31025 176 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 BORAQ6PGQ7 559 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 PRSS42Q7Z5A4 293 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 C10orf111Q8N326 155 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 POGLUT1Q8NBL1 392 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 BHLHE23Q8NDY6 225 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 OR11G2Q8NGC1 345 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 CT55Q8WUE5 264 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 TOMM40LQ969M1 308 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 ZC3HAV1LQ96H79 300 aaKnown RBP11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 ARHGDIGQ99819 225 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 RHNO1Q9BSD3 238 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 OR10A4Q9H209 315 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 HIF3AQ9Y2N7 669 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 PCDHGA5Q9Y5G8 931 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 ATP1B3P54709 279 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 OR52N1Q8NH53 320 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 DNASE2BQ8WZ79 361 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 AKAP1Q92667 903 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■■■□ 23.2
PTPRN2-202ENST00000389416 C10orf90Q96M02 699 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 TRIB1Q96RU8 372 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 UCK1Q9HA47 277 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 DYNLRB1Q9NP97 96 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 COPZ2Q9P299 210 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 TCFL5Q9UL49 500 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 TMA7Q9Y2S6 64 aaKnown RBP11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 SFTPBP07988 381 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 PSG6Q00889 435 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 THAP6Q8TBB0 222 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 C3orf49Q96BT1 292 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 NIPAL2Q9H841 368 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 C20orf141Q9NUB4 165 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 TAS2R8Q9NYW2 309 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 KCNIP1Q9NZI2 227 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 SLC5A6Q9Y289 635 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
PTPRN2-202ENST00000389416 A0A096LPE4 126 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 A0A1W2PPZ6 126 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 ITGB2P05107 769 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 H2AFB2P0C5Z0 115 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 CDK4P11802 303 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 AIMP2Q13155 320 aaKnown RBP11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 ARL6IP1Q15041 203 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 SYT6Q5T7P8 510 aaPredicted RBP11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 TRAPPC6BQ86SZ2 158 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 ACBD4Q8NC06 268 aa11.9□□□□□ -0.5
PTPRN2-202ENST00000389416 OR5H2Q8NGV7 314 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms