RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ACTG2P63267 376 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ACTC1P68032 377 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ACTA1P68133 377 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 MERTKQ12866 999 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 FZD2Q14332 565 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 CLINT1Q14677 625 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 MPPED2Q15777 294 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 SGCAQ16586 387 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 SLC16A14Q7RTX9 510 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 BBOF1Q8ND07 529 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 CCDC148Q8NFR7 591 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 OR4A4PQ8NGN8 299 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 TMEM54Q969K7 222 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 PIK3IP1Q96FE7 263 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 SLC29A1Q99808 456 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ANKRA2Q9H9E1 313 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 CTPS2Q9NRF8 586 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZNF226Q9NYT6 803 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ING4Q9UNL4 249 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 TRAPPC4Q9Y296 219 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 CACNG2Q9Y698 323 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 PINLYPA6NC86 204 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 F6UB75 175 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 CASQ2O14958 399 aaPredicted RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 TRAF3IP2O43734 574 aaPredicted RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZNF861PO60384 105 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 DUX4L4P0CJ87 422 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 CNR1P21554 472 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 CCNE1P24864 410 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 SLC1A1P43005 524 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 ADARB1P78563 741 aaKnown RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 PPM1LQ5SGD2 360 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 C6orf120Q7Z4R8 191 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 MREGQ8N565 214 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 NPBQ8NG41 125 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 OR51G1Q8NGK1 321 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZNF502Q8TBZ5 544 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 ACMSDQ8TDX5 336 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 TGS1Q96RS0 853 aaKnown RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 P2RX4Q99571 388 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 C11orf70Q9BRQ4 267 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 MTG1Q9BT17 334 aaPredicted RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 GABARAPL3Q9BY60 117 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 FGF20Q9NP95 211 aaPredicted RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 GCNT4Q9P109 453 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 NYAP2Q9P242 653 aa3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 RABL2AQ9UBK7 228 aaPredicted RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 CAB39Q9Y376 341 aaPredicted RBP3.69□□□□□ -1.82
RNU6-40P-201ENST00000384254 CNTNAP1P78357 1384 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 A0A1B0GVI7 797 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 PRSS37A4D1T9 235 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 NKX2-6A6NCS4 301 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZNF726A6NNF4 738 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 SIRPB1O00241 398 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 LAD1O00515 517 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 DNALI1O14645 258 aaPredicted RBP3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 CLPXO76031 633 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 IGHV3-43DP0DP04 118 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 GTF2E2P29084 291 aaKnown RBP3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 FGF8P55075 233 aaPredicted RBP3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 TWF1Q12792 350 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 TCP10Q12799 353 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 IL18Q14116 193 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 CHRNA6Q15825 494 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 C22orf42Q6IC83 251 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 CERS6Q6ZMG9 384 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 SSX9Q7RTT3 188 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 OAFQ86UD1 273 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZNF429Q86V71 674 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 Q8N7P7 452 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 TSEN15Q8WW01 171 aaKnown RBP3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 DNAJC19Q96DA6 116 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 AURKBQ96GD4 344 aaPredicted RBP3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 PKNOX2Q96KN3 472 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 FAM210BQ96KR6 192 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 GSDMAQ96QA5 445 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 PANX1Q96RD7 426 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 HDHD3Q9BSH5 251 aaPredicted RBP3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 KIAA1257Q9ULG3 409 aa3.68□□□□□ -1.82
RNU6-40P-201ENST00000384254 TRAV39A0A0B4J263 110 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 IGKV1D-13A0A0B4J2D9 117 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 CIB4A0PJX0 185 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 KLHL41O60662 606 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 SLC25A27O95847 323 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 PLEKP08567 350 aaPredicted RBP3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 SMIM10L1P0DMW3 83 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 IGKV1-13P0DP09 117 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 ANXA8P13928 327 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 RCC1P18754 421 aaPredicted RBP3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 ATP5OP48047 213 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 NMUP48645 174 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 CX3CR1P49238 355 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZNF133P52736 654 aaPredicted RBP3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 RPS21P63220 83 aaKnown RBP3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 REG3AQ06141 175 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 PSG5Q15238 335 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 ANXA8L1Q5VT79 327 aa3.67□□□□□ -1.82
RNU6-40P-201ENST00000384254 REEP3Q6NUK4 255 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms