RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ZNF587BE7ETH6 402 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 C16orf97H3BN30 126 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 XKRYO14609 159 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 CLDN1O95832 211 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 ITGA5P08648 1049 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 HIST1H1CP16403 213 aaKnown RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 PSMB1P20618 241 aaKnown RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 GRNP28799 593 aaKnown RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 EPHA2P29317 976 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 MPGP29372 298 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 NOS3P29474 1203 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 UGT2B10P36537 528 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 POLR2IP36954 125 aaKnown RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 ZNF133P52736 654 aaPredicted RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 ROR2Q01974 943 aaKnown RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 KRR1Q13601 381 aaKnown RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 THEM4Q5T1C6 240 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 SLC35F1Q5T1Q4 408 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 ABHD12BQ7Z5M8 362 aaPredicted RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 ADCK1Q86TW2 530 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 IQCF1Q8N6M8 205 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 ZNF433Q8N7K0 673 aaPredicted RBP13.61□□□□□ -0.23
PDGFB-202ENST00000381551 NOXO1Q8NFA2 376 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 OR4K13Q8NH42 304 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 FNDC8Q8TC99 324 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 MUS81Q96NY9 551 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 B3GAT2Q9NPZ5 323 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 TAS2R16Q9NYV7 291 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 ENOPH1Q9UHY7 261 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 GPR52Q9Y2T5 361 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 CACNA1CQ13936 2221 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 H7C1C5 153 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 C19orf84I3L1E1 186 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 LYZL6O75951 148 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 HMGN1P05114 100 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 LCN6P62502 163 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 NPRL3Q12980 569 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 TSC22D1Q15714 1073 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 STK11Q15831 433 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 GABRA6Q16445 453 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 LRRC36Q1X8D7 754 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 CEACAM16Q2WEN9 425 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 PGGHGQ32M88 737 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 OGFRL1Q5TC84 451 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-202ENST00000381551 TMEM236Q5W0B7 351 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 SLC25A47Q6Q0C1 308 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 PSMG3-AS1Q96PY0 264 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 SNX18Q96RF0 628 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 NMNAT3Q96T66 252 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 GABARAPL3Q9BY60 117 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 ULBP2Q9BZM5 246 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 SLC25A19Q9HC21 320 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 VSX1Q9NZR4 365 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-202ENST00000381551 COL12A1Q99715 3063 aa13.6□□□□□ -0.23
PDGFB-202ENST00000381551 IGKV1D-43A0A0B4J1Z2 117 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 OR6C68A6NDL8 312 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 DHHO43323 396 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 NR2C1P13056 603 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 PEX2P28328 305 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 GRK5P34947 590 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 RAD23AP54725 363 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 ARF1P84077 181 aaKnown RBP13.59□□□□□ -0.23
PDGFB-202ENST00000381551 TGFBR3Q03167 851 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 FMODQ06828 376 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDGFB-202ENST00000381551 CD47Q08722 323 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 C10orf128Q5T292 105 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 C9orf135Q5VTT2 229 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 BHLHA15Q7RTS1 189 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-202ENST00000381551 NPEPL1Q8NDH3 523 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 STEAP2Q8NFT2 490 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 KISS1RQ969F8 398 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-202ENST00000381551 BOD1Q96IK1 185 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 C8orf4Q9NR00 106 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 ORC6Q9Y5N6 252 aa13.59□□□□□ -0.23
PDGFB-202ENST00000381551 CIB4A0PJX0 185 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 ZAR1LA6NP61 321 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 ZNF99A8MXY4 864 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-202ENST00000381551 PRSS44E7EML9 344 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 SLC2A10O95528 541 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 ATP6V1G2O95670 118 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 IGFBP2P18065 325 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 CDH2P19022 906 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-202ENST00000381551 CCKARP32238 428 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-202ENST00000381551 SORDQ00796 357 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 SNTB1Q13884 538 aaKnown RBP13.58□□□□□ -0.24
PDGFB-202ENST00000381551 ZIK1Q3SY52 487 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-202ENST00000381551 SLX4IPQ5VYV7 408 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 OR7E24Q6IFN5 339 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 LEG1Q6P5S2 330 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 C22orf34Q6ZV56 151 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 ZNF627Q7L945 461 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 JAZF1Q86VZ6 243 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 GALNT4Q8N4A0 578 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 PACRGLQ8N7B6 248 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 ACBD4Q8NC06 268 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 SLC37A3Q8NCC5 494 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms