RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 CREB3L2Q70SY1 520 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 SSX6Q7RTT6 188 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 SLC16A9Q7RTY1 509 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 HDDC2Q7Z4H3 204 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 RFLNBQ8N5W9 214 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 SLC25A44Q96H78 314 aaPredicted RBP17.5■□□□□ 0.39
CCM2-202ENST00000381112 PCDHGA9Q9Y5G4 932 aaKnown RBP17.5■□□□□ 0.39
CCM2-202ENST00000381112 TVP23AA6NH52 213 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 LALBAP00709 142 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 ZNF708P17019 499 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 CENPAP49450 140 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 ACSM1Q08AH1 577 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 ETFDHQ16134 617 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 BCL2A1Q16548 175 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 OR9K2Q8NGE7 335 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 SF3B5Q9BWJ5 86 aaKnown RBP17.5■□□□□ 0.39
CCM2-202ENST00000381112 CCDC86Q9H6F5 360 aaKnown RBP17.5■□□□□ 0.39
CCM2-202ENST00000381112 TIGARQ9NQ88 270 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 COPS3Q9UNS2 423 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 CFAP47Q6ZTR5 3102 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 PIEZO1Q92508 2521 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 LOC400499M0QZD8 3231 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 ALPK2Q86TB3 2170 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 GPANK1O95872 356 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 IGHG1P01857 330 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 ITGB2P05107 769 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 PGA4P0DJD7 388 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 PGA3P0DJD8 388 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 CPEP16870 476 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 GADD45AP24522 165 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 PCSK6P29122 969 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 BLVRAP53004 296 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 PMP22Q01453 160 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 FMODQ06828 376 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 TPBGQ13641 420 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 PDSS1Q5T2R2 415 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 DNM1P34Q6PK57 102 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 ERI1Q8IV48 349 aaKnown RBP17.49■□□□□ 0.39
CCM2-202ENST00000381112 PHC2Q8IXK0 858 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 ALDH16A1Q8IZ83 802 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 ZADH2Q8N4Q0 377 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 RPL3LQ92901 407 aaKnown RBP17.49■□□□□ 0.39
CCM2-202ENST00000381112 ABTB1Q969K4 478 aaPredicted RBP17.49■□□□□ 0.39
CCM2-202ENST00000381112 ADAD1Q96M93 576 aaKnown RBP17.49■□□□□ 0.39
CCM2-202ENST00000381112 YIPF3Q9GZM5 350 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 PTTG2Q9NZH5 202 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 LIPGQ9Y5X9 500 aa17.49■□□□□ 0.39
CCM2-202ENST00000381112 ACTL6AO96019 429 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 CLDN17P56750 224 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 AQP6Q13520 282 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 CAMK2DQ13557 499 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 NOXO1Q8NFA2 376 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 NEIL3Q8TAT5 605 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 CPNE4Q96A23 557 aaPredicted RBP17.48■□□□□ 0.39
CCM2-202ENST00000381112 INTS14Q96SY0 518 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 DEFB127Q9H1M4 99 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 WDR76Q9H967 626 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 NDUFB11Q9NX14 153 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 BABAM2Q9NXR7 383 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 ZMIZ1Q9ULJ6 1067 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 SPTBN4Q9H254 2564 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 IGKV1D-43A0A0B4J1Z2 117 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 NPIPA2E9PIF3 369 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 NPIPA3F8WFD2 350 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 MT-ND5P03915 603 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 PTGS2P35354 604 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 HSF2Q03933 536 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 HIST3H3Q16695 136 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 THEM4Q5T1C6 240 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 LIPKQ5VXJ0 399 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 VASNQ6EMK4 673 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 ABLIM2Q6H8Q1 611 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 CDC20BQ86Y33 519 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 KLBQ86Z14 1044 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 ZIC4Q8N9L1 334 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 ROBO4Q8WZ75 1007 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 ZNF845Q96IR2 970 aaPredicted RBP17.48■□□□□ 0.39
CCM2-202ENST00000381112 RBP7Q96R05 134 aa17.48■□□□□ 0.39
CCM2-202ENST00000381112 MRPL22Q9NWU5 206 aaKnown RBP17.48■□□□□ 0.39
CCM2-202ENST00000381112 COA3Q9Y2R0 106 aaPredicted RBP17.48■□□□□ 0.39
CCM2-202ENST00000381112 FREM3P0C091 2139 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 ZNF726A6NNF4 738 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 AKAP8O43823 692 aaKnown RBP17.47■□□□□ 0.39
CCM2-202ENST00000381112 AIREO43918 545 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 CLRN1P58418 232 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 BDH1Q02338 343 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 GLO1Q04760 184 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 CDONQ4KMG0 1287 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 MEIOBQ8N635 442 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 C4orf36Q96KX1 117 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 FOXN4Q96NZ1 517 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 ZNF385AQ96PM9 386 aaKnown RBP17.47■□□□□ 0.39
CCM2-202ENST00000381112 OR51E2Q9H255 320 aa17.47■□□□□ 0.39
CCM2-202ENST00000381112 TRGV5A0A0B4J1U4 118 aa17.46■□□□□ 0.39
CCM2-202ENST00000381112 A0A1W2PPW3 197 aa17.46■□□□□ 0.39
CCM2-202ENST00000381112 ZNF716A6NP11 495 aa17.46■□□□□ 0.39
CCM2-202ENST00000381112 KHDRBS3O75525 346 aaKnown RBP17.46■□□□□ 0.39
CCM2-202ENST00000381112 HLA-DQA2P01906 255 aa17.46■□□□□ 0.39
CCM2-202ENST00000381112 ZNF24P17028 368 aa17.46■□□□□ 0.39
CCM2-202ENST00000381112 OR12D2P58182 307 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms