RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MS4A2Q01362 244 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 BSPH1Q075Z2 132 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TOP3AQ13472 1001 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 DGCR6Q14129 220 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 KEAP1Q14145 624 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 ACKR1Q16570 336 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 ALG10Q5BKT4 473 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 MTX3Q5HYI7 312 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 LCN8Q6JVE9 175 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 ANKRD16Q6P6B7 361 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 KLHL17Q6TDP4 642 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 SEZ6L2Q6UXD5 910 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TUBA1AQ71U36 451 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 OAFQ86UD1 273 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 OR4K5Q8NGD3 323 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 OR6X1Q8NH79 312 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 AKAP1Q92667 903 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 BCL2L2Q92843 193 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TMEM54Q969K7 222 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 ZNF566Q969W8 418 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 SLC7A6OSQ96CW6 309 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 ASB9Q96DX5 294 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 SLC25A44Q96H78 314 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 FAM46AQ96IP4 442 aaKnown RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 LRR1Q96L50 414 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TNFRSF13CQ96RJ3 184 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 BTBD10Q9BSF8 475 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 IL1RAPQ9NPH3 570 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 KRCC1Q9NPI7 259 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 GLTPQ9NZD2 209 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 NPAP1Q9NZP6 1156 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 AURKCQ9UQB9 309 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TMEM5Q9Y2B1 443 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 RNF115Q9Y4L5 304 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 MAGED1Q9Y5V3 778 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TCRBV5S2A0A599 114 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 SH3PXD2BA1X283 911 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ZNF99A8MXY4 864 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-202ENST00000380747 RPL36A-HNRNPH2H7BZ11 118 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 CDC42EP2O14613 210 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 DNAJC8O75937 253 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ATE1O95260 518 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 IGHG1P01857 330 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 RPL4P36578 427 aaKnown RBP8.07□□□□□ -1.12
HMGN1-202ENST00000380747 CAPZA2P47755 286 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 SLC9A3P48764 834 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 CTXN1P60606 82 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ADAM8P78325 824 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 CHRNB3Q05901 458 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 RUNX1T1Q06455 604 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 BNIP1Q12981 228 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 SEC23BQ15437 767 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 IQCCQ4KMZ1 466 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 FAM98BQ52LJ0 330 aaKnown RBP8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ADAM5Q6NVV9 412 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 TMEM108Q6UXF1 575 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ZNF813Q6ZN06 617 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 TMPRSS11FQ6ZWK6 438 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 HDDC2Q7Z4H3 204 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 SYT14Q8NB59 555 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 KBTBD8Q8NFY9 601 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ASB10Q8WXI3 467 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 NEUROG1Q92886 237 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 DHRS1Q96LJ7 313 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ZNF347Q96SE7 839 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 TMEM204Q9BSN7 226 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 NDEL1Q9GZM8 345 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 MAGIXQ9H6Y5 334 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 OBP2BQ9NPH6 170 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 TMCC3Q9ULS5 477 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 HIF3AQ9Y2N7 669 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 MPDZO75970 2070 aa8.07□□□□□ -1.12
HMGN1-202ENST00000380747 ARPC4-TTLL3A0A0A6YYG9 625 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 UNC119BA6NIH7 251 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 TNFRSF11BO00300 401 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ABCD4O14678 606 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ACOT8O14734 319 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 TRMUO75648 421 aaKnown RBP8.06□□□□□ -1.12
HMGN1-202ENST00000380747 QDPRP09417 244 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 TSPAN19P0C672 248 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 PGA4P0DJD7 388 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 PGA3P0DJD8 388 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 B4GALT1P15291 398 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ACADSP16219 412 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 PTAFRP25105 342 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 CD40P25942 277 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ACVR1BP36896 505 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 OMPP47874 163 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 RPS4XP62701 263 aaKnown RBP8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ERVK-25P63136 954 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 MYBPC1Q00872 1141 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 TRAP1Q12931 704 aaKnown RBP8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ZBED5Q49AG3 693 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 ARMC4Q5T2S8 1044 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 SLC22A25Q6T423 547 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 PIWIL3Q7Z3Z3 882 aaKnown RBP8.06□□□□□ -1.12
HMGN1-202ENST00000380747 NOXO1Q8NFA2 376 aa8.06□□□□□ -1.12
HMGN1-202ENST00000380747 MAGEE2Q8TD90 523 aaPredicted RBP8.06□□□□□ -1.12
HMGN1-202ENST00000380747 RSRC1Q96IZ7 334 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms