RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ZNF362Q5T0B9 420 aaPredicted RBP11.15□□□□□ -0.62
SMN1-202ENST00000380707 C9orf135Q5VTT2 229 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 FAM205BPQ63HN1 556 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 SLC27A4Q6P1M0 643 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 STAC2Q6ZMT1 411 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 NOXO1Q8NFA2 376 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 OR4K13Q8NH42 304 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 NMD3Q96D46 503 aaKnown RBP11.15□□□□□ -0.62
SMN1-202ENST00000380707 GPR35Q9HC97 309 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 ELOVL5Q9NYP7 299 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 TACC2O95359 2948 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 IGKV1D-43A0A0B4J1Z2 117 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 SLC22A23A1A5C7 686 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ZNF587BE7ETH6 402 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 RPL36A-HNRNPH2H7BZ11 118 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 LYZL6O75951 148 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 SLC2A10O95528 541 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 QDPRP09417 244 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 COX5AP20674 150 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 CD79BP40259 229 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 FMODQ06828 376 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 CD47Q08722 323 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 DBPQ10586 325 aaPredicted RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 NPRL3Q12980 569 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ITGADQ13349 1161 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 P2RY6Q15077 328 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 PGGHGQ32M88 737 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 OGFRL1Q5TC84 451 aaPredicted RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 GALNT4Q8N4A0 578 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ZNF433Q8N7K0 673 aaPredicted RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 NRG4Q8WWG1 115 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 RNASE6Q93091 150 aaKnown RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 MCHR2Q969V1 340 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 NMNAT3Q96T66 252 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ALG12Q9BV10 488 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 GABARAPL3Q9BY60 117 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ULBP2Q9BZM5 246 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 RIBC2Q9H4K1 309 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 NPDC1Q9NQX5 325 aaPredicted RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 BAIAP2Q9UQB8 552 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 C19orf84I3L1E1 186 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 SNAP29O95721 258 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 CLDN1O95832 211 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 CDH2P19022 906 aaPredicted RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 MPGP29372 298 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 CCKARP32238 428 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 UGT2B10P36537 528 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMN1-202ENST00000380707 CEACAM16Q2WEN9 425 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ZIK1Q3SY52 487 aaPredicted RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 THEM4Q5T1C6 240 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 SFRP5Q5T4F7 317 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 LEG1Q6P5S2 330 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ADCK1Q86TW2 530 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 NPEPL1Q8NDH3 523 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 SDR9C7Q8NEX9 313 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 OR52E2Q8NGJ4 325 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 RBP7Q96R05 134 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 SYT4Q9H2B2 425 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 SLC25A19Q9HC21 320 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 B3GAT2Q9NPZ5 323 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 TAS2R16Q9NYV7 291 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 VSX1Q9NZR4 365 aaPredicted RBP11.14□□□□□ -0.63
SMN1-202ENST00000380707 ENOPH1Q9UHY7 261 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 ORC6Q9Y5N6 252 aa11.14□□□□□ -0.63
SMN1-202ENST00000380707 HCFC1P51610 2035 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 A1L4Q6 167 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 OR6C68A6NDL8 312 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 ZAR1LA6NP61 321 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 C16orf97H3BN30 126 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 DLGAP1O14490 977 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 AHCYL1O43865 530 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 PSMB1P20618 241 aaKnown RBP11.13□□□□□ -0.63
SMN1-202ENST00000380707 GRK5P34947 590 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 ZNF133P52736 654 aaPredicted RBP11.13□□□□□ -0.63
SMN1-202ENST00000380707 RAD23AP54725 363 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 SNTB1Q13884 538 aaKnown RBP11.13□□□□□ -0.63
SMN1-202ENST00000380707 ABHD12BQ7Z5M8 362 aaPredicted RBP11.13□□□□□ -0.63
SMN1-202ENST00000380707 JAZF1Q86VZ6 243 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 CYB561A3Q8NBI2 242 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 NSMAFQ92636 917 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 KISS1RQ969F8 398 aaPredicted RBP11.13□□□□□ -0.63
SMN1-202ENST00000380707 LRRC46Q96FV0 321 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 TSSK2Q96PF2 358 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 MBOAT4Q96T53 435 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 DDOQ99489 341 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 GRIP2Q9C0E4 1043 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 TOR3AQ9H497 397 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 CMC2Q9NRP2 79 aa11.13□□□□□ -0.63
SMN1-202ENST00000380707 KLF2Q9Y5W3 355 aaPredicted RBP11.13□□□□□ -0.63
SMN1-202ENST00000380707 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
SMN1-202ENST00000380707 LRBAP50851 2863 aa11.12□□□□□ -0.63
SMN1-202ENST00000380707 ZNF99A8MXY4 864 aaPredicted RBP11.12□□□□□ -0.63
SMN1-202ENST00000380707 DCTN6O00399 190 aa11.12□□□□□ -0.63
SMN1-202ENST00000380707 SURF4O15260 269 aa11.12□□□□□ -0.63
SMN1-202ENST00000380707 DHHO43323 396 aa11.12□□□□□ -0.63
SMN1-202ENST00000380707 RAD51DO75771 328 aa11.12□□□□□ -0.63
SMN1-202ENST00000380707 SEC14L2O76054 403 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms