RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 FAM46AQ96IP4 442 aaKnown RBP18.94■□□□□ 0.62
NINJ1-201ENST00000375446 KCNS3Q9BQ31 491 aa18.94■□□□□ 0.62
NINJ1-201ENST00000375446 FUZQ9BT04 418 aa18.94■□□□□ 0.62
NINJ1-201ENST00000375446 TRAF4Q9BUZ4 470 aaPredicted RBP18.94■□□□□ 0.62
NINJ1-201ENST00000375446 MUC13Q9H3R2 512 aa18.94■□□□□ 0.62
NINJ1-201ENST00000375446 IL1RAPQ9NPH3 570 aa18.94■□□□□ 0.62
NINJ1-201ENST00000375446 B3GNT2Q9NY97 397 aa18.94■□□□□ 0.62
NINJ1-201ENST00000375446 OVOL3O00110 214 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 GADD45GO95257 159 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 IGHMP01871 453 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 CRYAAP02489 173 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 CD79AP11912 226 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 IDH3GP51553 393 aaPredicted RBP18.93■□□□□ 0.62
NINJ1-201ENST00000375446 RPL27P61353 136 aaKnown RBP18.93■□□□□ 0.62
NINJ1-201ENST00000375446 MYBPC1Q00872 1141 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 NAAAQ02083 359 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 TRIM25Q14258 630 aaKnown RBP18.93■□□□□ 0.62
NINJ1-201ENST00000375446 ZBED5Q49AG3 693 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 MTX3Q5HYI7 312 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 Q5PR19 223 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 AGAP6Q5VW22 663 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 ZDHHC21Q8IVQ6 265 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 NANOS1Q8WY41 292 aaKnown RBP18.93■□□□□ 0.62
NINJ1-201ENST00000375446 HDAC2Q92769 488 aaKnown RBP18.93■□□□□ 0.62
NINJ1-201ENST00000375446 SEC61A2Q9H9S3 476 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 TMEM38BQ9NVV0 291 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 ZNF346Q9UL40 294 aaKnown RBP18.93■□□□□ 0.62
NINJ1-201ENST00000375446 ARID1AO14497 2285 aa18.93■□□□□ 0.62
NINJ1-201ENST00000375446 MAP1AP78559 2803 aaPredicted RBP18.92■□□□□ 0.62
NINJ1-201ENST00000375446 TEP1Q99973 2627 aaKnown RBP18.92■□□□□ 0.62
NINJ1-201ENST00000375446 USF3Q68DE3 2245 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 ENTPD5O75356 428 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 UBOX5O94941 541 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 CD8AP01732 235 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 CELA3BP08861 270 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 TTKP33981 857 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 OMPP47874 163 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 LIMS1P48059 325 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 FABP6P51161 128 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 ZNF133P52736 654 aaPredicted RBP18.92■□□□□ 0.62
NINJ1-201ENST00000375446 NPRL3Q12980 569 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 GSG1Q2KHT4 349 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 LCN8Q6JVE9 175 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 ZNF544Q6NX49 715 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 MYPOPQ86VE0 399 aaPredicted RBP18.92■□□□□ 0.62
NINJ1-201ENST00000375446 DHFR2Q86XF0 187 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 FBXL14Q8N1E6 418 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 SLC22A24Q8N4F4 322 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 GTPBP3Q969Y2 492 aaKnown RBP18.92■□□□□ 0.62
NINJ1-201ENST00000375446 NMD3Q96D46 503 aaKnown RBP18.92■□□□□ 0.62
NINJ1-201ENST00000375446 TMUB1Q9BVT8 246 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 GRIP2Q9C0E4 1043 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 KRCC1Q9NPI7 259 aaPredicted RBP18.92■□□□□ 0.62
NINJ1-201ENST00000375446 PLCE1Q9P212 2302 aa18.92■□□□□ 0.62
NINJ1-201ENST00000375446 TCRBV5S2A0A599 114 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 SH3PXD2BA1X283 911 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 OR8G3PP0DMU2 310 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 CD99P14209 185 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 ZNF26P17031 533 aaPredicted RBP18.91■□□□□ 0.62
NINJ1-201ENST00000375446 RPL4P36578 427 aaKnown RBP18.91■□□□□ 0.62
NINJ1-201ENST00000375446 ACVR1BP36896 505 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 ZNF84P51523 738 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 MS4A2Q01362 244 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 PIGFQ07326 219 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 FAM205BPQ63HN1 556 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 PRSS57Q6UWY2 283 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 SKA3Q8IX90 412 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 MUC15Q8N387 334 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 ZNF519Q8TB69 540 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 CLPTM1LQ96KA5 538 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 TSPAN32Q96QS1 320 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 KCNK17Q96T54 332 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 THTPAQ9BU02 230 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 ALG12Q9BV10 488 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 NDEL1Q9GZM8 345 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 NOX3Q9HBY0 568 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 ZNF224Q9NZL3 707 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 AURKCQ9UQB9 309 aa18.91■□□□□ 0.62
NINJ1-201ENST00000375446 A6NIZ1 184 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 UBL3O95164 117 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 FARS2O95363 451 aaKnown RBP18.9■□□□□ 0.62
NINJ1-201ENST00000375446 CD14P08571 375 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 NR2C1P13056 603 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 CALCRP30988 508 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 RRM2P31350 389 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 CDKN1AP38936 164 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 ATP5J2P56134 94 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 RAP1BP61224 184 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 RAP1AP62834 184 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 ERVK-25P63136 954 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 CD47Q08722 323 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 C10orf128Q5T292 105 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 YTHDF3Q7Z739 585 aaKnown RBP18.9■□□□□ 0.62
NINJ1-201ENST00000375446 ARIH2OSQ8N7S6 290 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 CCDC124Q96CT7 223 aaKnown RBP18.9■□□□□ 0.62
NINJ1-201ENST00000375446 DENND2DQ9H6A0 471 aaPredicted RBP18.9■□□□□ 0.62
NINJ1-201ENST00000375446 SMURF2Q9HAU4 748 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 CBLN4Q9NTU7 201 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 SIGLEC7Q9Y286 467 aa18.9■□□□□ 0.62
NINJ1-201ENST00000375446 PTP4A3O75365 173 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms