RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SLC35G3Q8N808 338 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 OR56B1Q8NGI3 324 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 RAB40AQ8WXH6 277 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 NTN4Q9HB63 628 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 TBX21Q9UL17 535 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 HBE1P02100 147 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 SRFP11831 508 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 LAP3P28838 519 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 CASP3P42574 277 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF595Q8IYB9 648 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 PXT1Q8NFP0 134 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 NANPQ8TBE9 248 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 SORT1Q99523 831 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 NAA50Q9GZZ1 169 aaKnown RBP13.21□□□□□ -0.3
TRAF1-201ENST00000373887 TBC1D29Q9UFV1 150 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 DUSP13Q9UII6 198 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 NXPH2O95156 264 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 SIX6O95475 246 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 GASTP01350 101 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 IGHV3-9P01782 118 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 BCL6P41182 706 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 PPP2CBP62714 309 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 PPP2CAP67775 309 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF468Q5VIY5 522 aaPredicted RBP13.2□□□□□ -0.3
TRAF1-201ENST00000373887 HSD17B11Q8NBQ5 300 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 FAM174AQ8TBP5 190 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 EDEM2Q9BV94 578 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 CNIH1O95406 144 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 SELPLGQ14242 412 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 C6orf15Q6UXA7 325 aaPredicted RBP13.2□□□□□ -0.3
TRAF1-201ENST00000373887 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 LILRB4Q8NHJ6 448 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 ZMAT3Q9HA38 289 aaKnown RBP13.2□□□□□ -0.3
TRAF1-201ENST00000373887 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 NXT1Q9UKK6 140 aaKnown RBP13.2□□□□□ -0.3
TRAF1-201ENST00000373887 MYO10Q9HD67 2058 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 CTGFP29279 349 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 ACTBL2Q562R1 376 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 ZNRF4Q8WWF5 429 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 TVP23CQ96ET8 276 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 KCNJ15Q99712 375 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 DEFB127Q9H1M4 99 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 RAB35Q15286 201 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 DEFB109BQ30KR1 87 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 RPL22L1Q6P5R6 122 aaKnown RBP13.2□□□□□ -0.3
TRAF1-201ENST00000373887 Q6ZTK2 550 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 ETFBKMTQ8IXQ9 262 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 RAB19A4D1S5 217 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 EPHA5P54756 1037 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 TFF2Q03403 129 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 MPPED2Q15777 294 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM52BQ4KMG9 183 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 SYT13Q7L8C5 426 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 MARCH3Q86UD3 253 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 PIGTQ969N2 578 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 C1orf198Q9H425 327 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 CLCF1Q9UBD9 225 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 KCND3Q9UK17 655 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 EMCNQ9ULC0 261 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 EMC9Q9Y3B6 208 aa13.2□□□□□ -0.3
TRAF1-201ENST00000373887 TLCD2A6NGC4 264 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 CNR1P21554 472 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 PSMB3P49720 205 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 TBPL2Q6SJ96 375 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 MED25Q71SY5 747 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 NRARPQ7Z6K4 114 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SLC22A7Q9Y694 548 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 GRPP07492 148 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 MAKP20794 623 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 CCR6P51684 374 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 LGALS4P56470 323 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SOHLH1Q5JUK2 328 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 AAED1Q7RTV5 226 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 ATP13A2Q9NQ11 1180 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 HS3ST3A1Q9Y663 406 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 NHSQ6T4R5 1651 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 CHEK1O14757 476 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 YKT6O15498 198 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 FABP7O15540 132 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 HLA-HP01893 362 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SHC1P29353 583 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 GPLD1P80108 840 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAF1-201ENST00000373887 C8orf44Q96CB5 159 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 CNOT2Q9NZN8 540 aaKnown RBP13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SLAMF8Q9P0V8 285 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 A0A087WZY1 265 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 TNFSF15O95150 251 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SSX9Q7RTT3 188 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 NIPSNAP3BQ9BS92 247 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 CHST11Q9NPF2 352 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 HEYLQ9NQ87 328 aaPredicted RBP13.19□□□□□ -0.3
TRAF1-201ENST00000373887 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 OBP2AQ9NY56 170 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 ARL2-SNX15V9GYD0 113 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 FOXE1O00358 373 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms