RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 P2RY10O00398 339 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 TNFRSF10CO14798 259 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 HBE1P02100 147 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 HTD2P86397 168 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 ASAH1Q13510 395 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 TMEM31Q5JXX7 168 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 COL13A1Q5TAT6 717 aaPredicted RBP10.52□□□□□ -0.73
PTPRF-203ENST00000372407 CAMKMTQ7Z624 323 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 LINC00346Q8IVM7 164 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 BORCS7Q96B45 105 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 ARPC5LQ9BPX5 153 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 GABARAPL3Q9BY60 117 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 ZMAT3Q9HA38 289 aaKnown RBP10.52□□□□□ -0.73
PTPRF-203ENST00000372407 FGF22Q9HCT0 170 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 OR52A1Q9UKL2 312 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 E9PI62 339 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 GABARAPH6UMI1 98 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 EIF1BO60739 113 aaKnown RBP10.52□□□□□ -0.73
PTPRF-203ENST00000372407 GPX5O75715 221 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 MT-ATP6P00846 226 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 NAGAP17050 411 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 TNFSF4P23510 183 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 EIF1P41567 113 aaKnown RBP10.52□□□□□ -0.73
PTPRF-203ENST00000372407 CSNK1EP49674 416 aaKnown RBP10.52□□□□□ -0.73
PTPRF-203ENST00000372407 DHRS4L2Q6PKH6 230 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF836Q6ZNA1 936 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 ADGRE4PQ86SQ3 457 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 ADGRF3Q8IZF5 1079 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 LRRC18Q8N456 261 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 PLPP5Q8NEB5 264 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 RASD2Q96D21 266 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 GABARAPL1Q9H0R8 117 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 PDFQ9HBH1 243 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 TUBG2Q9NRH3 451 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 QPCTLQ9NXS2 382 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 NRXN2Q9P2S2 1712 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 A0A1B0GTW7 788 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 HOXC11O43248 304 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 ARRB2P32121 409 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 PLGLAQ15195 96 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 IAH1Q2TAA2 248 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 TCTN3Q6NUS6 607 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 LANCL3Q6ZV70 420 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 DYNC2LI1Q8TCX1 351 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 FGGYQ96C11 551 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 TSSK2Q96PF2 358 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 PKMYT1Q99640 499 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SLC19A3Q9BZV2 496 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 IKZF5Q9H5V7 419 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SEC16AO15027 2179 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 NINQ8N4C6 2090 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 A0A1W2PR48 441 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 A6NL46 340 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 TARM1B6A8C7 271 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SHOXO15266 292 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SIGLEC6O43699 453 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 C1QBP02746 253 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 ZDHHC11BP0C7U3 371 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 ELK1P19419 428 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 OMGP23515 440 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 ETV1P50549 477 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 UBE2KP61086 200 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 GABREP78334 506 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 DCDP81605 110 aaKnown RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 TRMT12Q53H54 448 aaKnown RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SOHLH1Q5JUK2 328 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 CD300LGQ6UXG3 332 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF620Q6ZNG0 422 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 PGAP1Q75T13 922 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 MDGA2Q7Z553 956 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SYT9Q86SS6 491 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 LIN37Q96GY3 246 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SEC22CQ9BRL7 303 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 PBX4Q9BYU1 374 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 C20orf85Q9H1P6 137 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 TNFRSF12AQ9NP84 129 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 OBP2BQ9NPH6 170 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 CMC2Q9NRP2 79 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SERTAD4Q9NUC0 356 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 MED16Q9Y2X0 877 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SPAG17Q6Q759 2223 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 CDK5RAP2Q96SN8 1893 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 RNF212BA8MTL3 300 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 M0QYG6 137 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 HMGN4O00479 90 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 RAF1P04049 648 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 PGFP49763 221 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 SECTM1Q8WVN6 248 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 ELF4Q99607 663 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 MYOTQ9UBF9 498 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 PUS1Q9Y606 427 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTPRF-203ENST00000372407 NUMBLQ9Y6R0 609 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 TMPRSS11DO60235 418 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 CNR1P21554 472 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 KITLGP21583 273 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 IL32P24001 234 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 LIM2P55344 173 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 GDPD3Q7L5L3 318 aa10.51□□□□□ -0.73
PTPRF-203ENST00000372407 OVCH1Q7RTY7 1134 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms