RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 RAB40BQ12829 278 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 SELENBP1Q13228 472 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 OR10D3Q8NH80 312 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 C9orf43Q8TAL5 461 aaPredicted RBP12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 MCTS1Q9ULC4 181 aaKnown RBP12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 EXOSC1Q9Y3B2 195 aaKnown RBP12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 DMXL2Q8TDJ6 3036 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 ACOD1A6NK06 481 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 DLGAP3O95886 979 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 IGHG1P01857 330 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 CTLA4P16410 223 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 WT1P19544 449 aaPredicted RBP12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 RPS25P62851 125 aaKnown RBP12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 SLC35A1P78382 337 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 PLPPR5Q32ZL2 321 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 DBX2Q6ZNG2 339 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 OR6V1Q8N148 313 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 ACOXLQ9NUZ1 547 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 ZNF229Q9UJW7 825 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 GMEB1Q9Y692 573 aa12.8□□□□□ -0.36
SEMA6C-204ENST00000368914 A0A0J9YW62 118 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 IRGMA1A4Y4 181 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 TO15178 435 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 MYL9P24844 172 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 BMXP51813 675 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 GMFBP60983 142 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 SLC22A16Q86VW1 577 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 NEIL3Q8TAT5 605 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 SLC7A6Q92536 515 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 CRELD1Q96HD1 420 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 ASH2LQ9UBL3 628 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 KLF13Q9Y2Y9 288 aaPredicted RBP12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 CORINQ9Y5Q5 1042 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 AKAP13Q12802 2813 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 IGHV3-64DA0A0J9YX35 117 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 PINLYPA6NC86 204 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 MAS1P04201 325 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 HTR1FP30939 366 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 DAP3P51398 398 aaKnown RBP12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 HNRNPA0Q13151 305 aaKnown RBP12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 TUBA3CQ13748 450 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 TMEM44Q2T9K0 475 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 C12orf73Q69YU5 71 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 TUBA3EQ6PEY2 450 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 RFLNBQ8N5W9 214 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 KBTBD8Q8NFY9 601 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 OR2M7Q8NG81 312 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 FCGR1BQ92637 280 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 IP6K3Q96PC2 410 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 FAM173AQ9BQD7 235 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 VSX1Q9NZR4 365 aaPredicted RBP12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 KLHL21Q9UJP4 597 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 NOSIPQ9Y314 301 aaKnown RBP12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 COL4A2P08572 1712 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 ZNF891A8MT65 544 aaPredicted RBP12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 LRP3O75074 770 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 FAM71F1Q96KD3 344 aaPredicted RBP12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 DAPK2Q9UIK4 370 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 BAIAP2Q9UQB8 552 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 FREM1Q5H8C1 2179 aa12.79□□□□□ -0.36
SEMA6C-204ENST00000368914 A0A1W2PQ72 361 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 CDK4P11802 303 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 GABARAPL2P60520 117 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 SNRPGP62308 76 aaKnown RBP12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 DDI2Q5TDH0 399 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 TRIB1Q96RU8 372 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 GJE1A6NN92 205 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 MKRN2OSH3BPM6 223 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 BHLHE40O14503 412 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 TPD52L2O43399 206 aaKnown RBP12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 TAB1Q15750 504 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 HGDQ93099 445 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 ZNF385AQ96PM9 386 aaKnown RBP12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 PLEKHA1Q9HB21 404 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 TGM1P22735 817 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 SDC2P34741 201 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 NBL1P41271 181 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 FXYD6P3P58550 94 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 TUBA1BP68363 451 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 SPANXN2Q5MJ10 180 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 TUBA1AQ71U36 451 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 KCTD7Q96MP8 289 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 GPER1Q99527 375 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 ERVK13-1Q9NX77 482 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 ESPL1Q14674 2120 aa12.78□□□□□ -0.36
SEMA6C-204ENST00000368914 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 FAPQ12884 760 aa12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 GPR139Q6DWJ6 353 aa12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 CISD2Q8N5K1 135 aaKnown RBP12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 TMEM251Q8N6I4 163 aa12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 PPP1R14AQ96A00 147 aa12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 INTS12Q96CB8 462 aaKnown RBP12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 COQ7Q99807 217 aa12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 ING3Q9NXR8 418 aa12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 SLC5A6Q9Y289 635 aa12.77□□□□□ -0.36
SEMA6C-204ENST00000368914 PRSS37A4D1T9 235 aa12.77□□□□□ -0.37
SEMA6C-204ENST00000368914 E9PI62 339 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms