RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SHISA6Q6ZSJ9 500 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ZNF671Q8TAW3 534 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ZNF524Q96C55 264 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 NXPE2Q96DL1 559 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 TSSK2Q96PF2 358 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 MARVELD1Q9BSK0 173 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 CRB3Q9BUF7 120 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 TCF7L1Q9HCS4 588 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 NOX4Q9NPH5 578 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 COPZ2Q9P299 210 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 MRM2Q9UI43 246 aaKnown RBP12.65□□□□□ -0.38
USF1-202ENST00000368020 IKZF2Q9UKS7 526 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 CAMK2AQ9UQM7 478 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 IGLV3-32A0A0A0MS00 114 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 C11orf98E9PRG8 122 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 GMFGO60234 142 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 ZNF254O75437 659 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 CALCBP10092 127 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 ATF1P18846 271 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 FKBP2P26885 142 aaKnown RBP12.64□□□□□ -0.39
USF1-202ENST00000368020 CCR9P51686 369 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 ZNF41P51814 821 aaPredicted RBP12.64□□□□□ -0.39
USF1-202ENST00000368020 GLO1Q04760 184 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 ZFP36L1Q07352 338 aaKnown RBP12.64□□□□□ -0.39
USF1-202ENST00000368020 PUDPQ08623 228 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 DBPQ10586 325 aaPredicted RBP12.64□□□□□ -0.39
USF1-202ENST00000368020 SLC18B1Q6NT16 456 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 CDH24Q86UP0 819 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 SLC38A9Q8NBW4 561 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 ZNF417Q8TAU3 575 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 NSMAFQ92636 917 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 MRGPRX4Q96LA9 322 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 POTEKPQ9BYX7 375 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 B9D1Q9UPM9 204 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 ETV7Q9Y603 341 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 V9GY05 133 aa12.64□□□□□ -0.39
USF1-202ENST00000368020 IGHV3-20A0A0C4DH32 117 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 TRBV5-5A0A0J9YX44 114 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 IFITM5A6NNB3 132 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 FAM171A2A8MVW0 826 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 FAM47E-STBD1D6RA91 191 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 DCTN6O00399 190 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 MAGEB4O15481 346 aaPredicted RBP12.63□□□□□ -0.39
USF1-202ENST00000368020 GSTZ1O43708 216 aaPredicted RBP12.63□□□□□ -0.39
USF1-202ENST00000368020 RAB40ALP0C0E4 278 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 OR8G3PP0DMU2 310 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 RAB25P57735 213 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 FBXW4P57775 412 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 NANOS3P60323 173 aaKnown RBP12.63□□□□□ -0.39
USF1-202ENST00000368020 CARTPTQ16568 116 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 SLC25A53Q5H9E4 307 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 DPY19L4Q7Z388 723 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 GPR148Q8TDV2 347 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 RAB40AQ8WXH6 277 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 TRIM63Q969Q1 353 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 SPSB2Q99619 263 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 WDR77Q9BQA1 342 aaPredicted RBP12.63□□□□□ -0.39
USF1-202ENST00000368020 OR2B2Q9GZK3 357 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 MMP28Q9H239 520 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 PPP4R1LQ9P1A2 415 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 MYOTQ9UBF9 498 aa12.63□□□□□ -0.39
USF1-202ENST00000368020 GPN3Q9UHW5 284 aaPredicted RBP12.63□□□□□ -0.39
USF1-202ENST00000368020 FTCDNL1E5RQL4 147 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 H7C1C5 153 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ADAM10O14672 748 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 SULT1B1O43704 296 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 AKR7A3O95154 331 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 TIAF1O95411 115 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 HLA-DQA2P01906 255 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 FAM157BP0CG42 384 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 CSRP1P21291 193 aaKnown RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 SLC6A1P30531 599 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 BTG1P62324 171 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 LCN6P62502 163 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 ROM1Q03395 351 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 PHF19Q5T6S3 580 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 C1QL3Q5VWW1 255 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 LYPD4Q6UWN0 246 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 H1FNTQ75WM6 255 aaPredicted RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 HDDC2Q7Z4H3 204 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ZNF679Q8IYX0 411 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 THEM6Q8WUY1 208 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ITFG2Q969R8 447 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 MAP6Q96JE9 813 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ZNF587Q96SQ5 575 aaPredicted RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 KLHDC3Q9BQ90 382 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 FANCFQ9NPI8 374 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 SERINC1Q9NRX5 453 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 KLRF1Q9NZS2 232 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 PCNX3Q9H6A9 2034 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 SLC22A23A1A5C7 686 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 TVP23AA6NH52 213 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 MEN1O00255 615 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 GPR171O14626 319 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms