RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 IL7RP16871 459 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 FUT4P22083 530 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 MAPK1P28482 360 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 MPV17P39210 176 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 COL10A1Q03692 680 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 SYPL1Q16563 259 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 CFAP157Q5JU67 520 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 GPR157Q5UAW9 335 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 ZCCHC23Q6ZST2 131 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 ZNF440Q8IYI8 595 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 ZNF283Q8N7M2 679 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 ANKFN1Q8N957 763 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 OR1J1Q8NGS3 322 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 RAB40AQ8WXH6 277 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 PHF21AQ96BD5 680 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 SIGLEC11Q96RL6 698 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 LOC102725191A0A1B0GVB3 256 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 CDHR4A6H8M9 788 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 TMEM233B4DJY2 109 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 HMGN4O00479 90 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 GPR37O15354 613 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 MPIG6BO95866 241 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 C1QCP02747 245 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 PRG2P13727 222 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 PRPS1L1P21108 318 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 BPIFB3P59826 476 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 DNAJB13P59910 316 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 EGR3Q06889 387 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 TBC1D28Q2M2D7 210 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 SPATA46Q5T0L3 261 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 OR4F3Q6IEY1 312 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 OR4A15Q8NGL6 344 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 TBC1D15Q8TC07 691 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 DPY30Q9C005 99 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 C1orf198Q9H425 327 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 TENM2Q9NT68 2774 aa12.22□□□□□ -0.45
VAMP4-202ENST00000367740 TNFRSF13BO14836 293 aaPredicted RBP12.21□□□□□ -0.45
VAMP4-202ENST00000367740 PEX11AO75192 247 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 CHEK2O96017 543 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 WNT2P09544 360 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 GCAP28676 217 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 GRPRP30550 384 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 FGF12P61328 243 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 COPZ1P61923 177 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 GNA13Q14344 377 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 PGS1Q32NB8 556 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 ZNF836Q6ZNA1 936 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 PIWIL3Q7Z3Z3 882 aaKnown RBP12.21□□□□□ -0.45
VAMP4-202ENST00000367740 SNX32Q86XE0 403 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 UEVLDQ8IX04 471 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 SLC22A24Q8N4F4 322 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 OR6N1Q8NGY5 312 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 TWIST2Q8WVJ9 160 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 THOC1Q96FV9 657 aaKnown RBP12.21□□□□□ -0.45
VAMP4-202ENST00000367740 TXNDC15Q96J42 360 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 PPP3R2Q96LZ3 170 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 TRNT1Q96Q11 434 aaKnown RBP12.21□□□□□ -0.45
VAMP4-202ENST00000367740 ARHGDIGQ99819 225 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 SH3GL3Q99963 347 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 NANOGQ9H9S0 305 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.45
VAMP4-202ENST00000367740 LYSTQ99698 3801 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 KIR2DS1A0A191URI9 304 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 MS4A18H0YCH9 400 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 K7EIL1 84 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 RNASET2O00584 256 aaKnown RBP12.2□□□□□ -0.46
VAMP4-202ENST00000367740 ZSCAN12O43309 604 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 DBIP07108 87 aaKnown RBP12.2□□□□□ -0.46
VAMP4-202ENST00000367740 UQCRC2P22695 453 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 ARRB2P32121 409 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 MDH2P40926 338 aaKnown RBP12.2□□□□□ -0.46
VAMP4-202ENST00000367740 TNFAIP6P98066 277 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-202ENST00000367740 BST1Q10588 318 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 LARS2Q15031 903 aaKnown RBP12.2□□□□□ -0.46
VAMP4-202ENST00000367740 MS4A18Q3C1V0 323 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 XKR7Q5GH72 579 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 THEM4Q5T1C6 240 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 IL23RQ5VWK5 629 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 NHLRC1Q6VVB1 395 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 LRRC74BQ6ZQY2 392 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 H1FNTQ75WM6 255 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-202ENST00000367740 ZNF101Q8IZC7 436 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 MIER2Q8N344 545 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 ADPRHL1Q8NDY3 354 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 TAAR8Q969N4 342 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 MARS2Q96GW9 593 aaKnown RBP12.2□□□□□ -0.46
VAMP4-202ENST00000367740 TOR3AQ9H497 397 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 MSL2Q9HCI7 577 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
VAMP4-202ENST00000367740 DNAH1Q9P2D7 4330 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 ZNF816-ZNF321PA0A0X1KG74 233 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 TSPAN9O75954 239 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 PROCP04070 461 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
VAMP4-202ENST00000367740 NCF2P19878 526 aaPredicted RBP12.19□□□□□ -0.46
VAMP4-202ENST00000367740 CBLP22681 906 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 IER3P46695 156 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 GNB2P62879 340 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 HERPUD1Q15011 391 aa12.19□□□□□ -0.46
VAMP4-202ENST00000367740 SMU1Q2TAY7 513 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms