RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 DBPQ10586 325 aaPredicted RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 FHL1Q13642 323 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 OAFQ86UD1 273 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 OR6X1Q8NH79 312 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 MCUR1Q96AQ8 359 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 FOXB1Q99853 325 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 USB1Q9BQ65 265 aaKnown RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 GLTPQ9NZD2 209 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 ACTR3BQ9P1U1 418 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 HIF3AQ9Y2N7 669 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 MAGED1Q9Y5V3 778 aaPredicted RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 ATP23Q9Y6H3 246 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 IGKV1D-43A0A0B4J1Z2 117 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 E7EQL1 145 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 IGHG1P01857 330 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 QDPRP09417 244 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 CECR9P0C854 216 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 PAX1P15863 534 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 RPL4P36578 427 aaKnown RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 ACVR1BP36896 505 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 DAP3P51398 398 aaKnown RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 ERVK-25P63136 954 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 ARMC4Q5T2S8 1044 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 LCN8Q6JVE9 175 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 RRM2BQ7LG56 351 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 DHFR2Q86XF0 187 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 LRRC75AQ8NAA5 344 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 FGFBP3Q8TAT2 258 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 TMEM171Q8WVE6 324 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 LIPHQ8WWY8 451 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 NSMAFQ92636 917 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 SLC25A44Q96H78 314 aaPredicted RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 RSRC1Q96IZ7 334 aaKnown RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 DHRS1Q96LJ7 313 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 ADAD1Q96M93 576 aaKnown RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 SLC38A2Q96QD8 506 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 GPA33Q99795 319 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 KATNB1Q9BVA0 655 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 ZNF701Q9NV72 531 aaPredicted RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 VNN3Q9NY84 501 aa12.76□□□□□ -0.37
SF3B5-201ENST00000367569 CISD1Q9NZ45 108 aaKnown RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 PRPF19Q9UMS4 504 aaKnown RBP12.76□□□□□ -0.37
SF3B5-201ENST00000367569 ARPC4-TTLL3A0A0A6YYG9 625 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 A0A1W2PRQ8 180 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 SH3PXD2BA1X283 911 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 IMPA2O14732 288 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 GYG2O15488 501 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 IGF2P01344 180 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 TSPAN19P0C672 248 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 ACADSP16219 412 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 PTAFRP25105 342 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 PCSK6P29122 969 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 CALCRP30988 508 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 CDAP32320 146 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 OMPP47874 163 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 LIMS1P48059 325 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 DGCR6Q14129 220 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 PGGHGQ32M88 737 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 OTPQ5XKR4 325 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 LRFN4Q6PJG9 635 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 VHLLQ6RSH7 139 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 THSD4Q6ZMP0 1018 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 PRIMA1Q86XR5 153 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 ZNF611Q8N823 705 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 OR9Q2Q8NGE9 314 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 SMAP2Q8WU79 429 aaPredicted RBP12.75□□□□□ -0.37
SF3B5-201ENST00000367569 MCHR2Q969V1 340 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 SLC7A6OSQ96CW6 309 aaPredicted RBP12.75□□□□□ -0.37
SF3B5-201ENST00000367569 RASD2Q96D21 266 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 FOXN4Q96NZ1 517 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 FUZQ9BT04 418 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 TXNIPQ9H3M7 391 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 ANKRD19PQ9H560 264 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 ZNF224Q9NZL3 707 aa12.75□□□□□ -0.37
SF3B5-201ENST00000367569 ZNF346Q9UL40 294 aaKnown RBP12.75□□□□□ -0.37
SF3B5-201ENST00000367569 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
SF3B5-201ENST00000367569 DHHO43323 396 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 OR10H3O60404 316 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 ITGA2P17301 1181 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
SF3B5-201ENST00000367569 FXYD6P3P58550 94 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
SF3B5-201ENST00000367569 TRIM25Q14258 630 aaKnown RBP12.74□□□□□ -0.37
SF3B5-201ENST00000367569 ZBED5Q49AG3 693 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 SKA3Q8IX90 412 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 CDK20Q8IZL9 346 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 FANK1Q8TC84 345 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 LRR1Q96L50 414 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 LRGUKQ96M69 825 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 Q96M85 177 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 CXorf56Q9H5V9 222 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 TMEM38BQ9NVV0 291 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 AURKCQ9UQB9 309 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 TMEM5Q9Y2B1 443 aa12.74□□□□□ -0.37
SF3B5-201ENST00000367569 TEX13CA0A0J9YWL9 993 aa12.73□□□□□ -0.37
SF3B5-201ENST00000367569 A0A1W2PPL8 197 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms