RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SGK3Q96BR1 496 aa2.55□□□□□ -2
RNU6-28P-201ENST00000362378 SLC29A1Q99808 456 aa2.55□□□□□ -2
RNU6-28P-201ENST00000362378 BPIFA3Q9BQP9 254 aa2.55□□□□□ -2
RNU6-28P-201ENST00000362378 OSBPL10Q9BXB5 764 aa2.55□□□□□ -2
RNU6-28P-201ENST00000362378 NANOGQ9H9S0 305 aa2.55□□□□□ -2
RNU6-28P-201ENST00000362378 TRBV9A0A0B4J1U6 114 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 TRAV39A0A0B4J263 110 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 A0A0B4J2A0 478 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 LRRIQ4A6NIV6 560 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 A8MU10 97 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 CDC7O00311 574 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 NDUFAB1O14561 156 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 PPP1R2P9O14990 202 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 ZNF861PO60384 105 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 CLPXO76031 633 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 KLF8O95600 359 aaPredicted RBP2.54□□□□□ -2
RNU6-28P-201ENST00000362378 CLIC3O95833 236 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 INSP01308 110 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 IGHV4-34P06331 123 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 GIPP09681 153 aaPredicted RBP2.54□□□□□ -2
RNU6-28P-201ENST00000362378 CSF3P09919 207 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 FOLR1P15328 257 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 CCNE1P24864 410 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 SERPINB5P36952 375 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 SLC1A1P43005 524 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 RFX3P48380 749 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 RORCP51449 518 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 LIPEQ05469 1076 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 SGCAQ16586 387 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 HSDL1Q3SXM5 330 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 LCN12Q6JVE5 192 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 ANKRD26P1Q6NSI1 321 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 REEP3Q6NUK4 255 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 H2AFVQ71UI9 128 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 SSX9Q7RTT3 188 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 SLC16A14Q7RTX9 510 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 GABRG1Q8N1C3 465 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 FAM71E2Q8N5Q1 922 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 PQLC3Q8N755 202 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 OR6X1Q8NH79 312 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 ACER1Q8TDN7 264 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 SDR42E1Q8WUS8 393 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 STARD8Q92502 1023 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 ELSPBP1Q96BH3 223 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 LRRC58Q96CX6 371 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 PIK3IP1Q96FE7 263 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 DUS3LQ96G46 650 aaKnown RBP2.54□□□□□ -2
RNU6-28P-201ENST00000362378 OR2M2Q96R28 347 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 TMEM165Q9HC07 324 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 CTPS2Q9NRF8 586 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 LYARQ9NX58 379 aaKnown RBP2.54□□□□□ -2
RNU6-28P-201ENST00000362378 UXTQ9UBK9 157 aaPredicted RBP2.54□□□□□ -2
RNU6-28P-201ENST00000362378 SHPKQ9UHJ6 478 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 ZNF225Q9UK10 706 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 ING4Q9UNL4 249 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 TP53TG5Q9Y2B4 290 aa2.54□□□□□ -2
RNU6-28P-201ENST00000362378 CEMIPQ8WUJ3 1361 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 TTC41PQ6P2S7 1318 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 H3BNH8 94 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 PANO1I0J062 215 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 CASC3O15234 703 aaKnown RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 EIF3HO15372 352 aaKnown RBP eCLIP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 DNAJB6O75190 326 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 C6orf47O95873 294 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 OR8G3PP0DMU2 310 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 SMIM10L1P0DMW3 83 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 ZNF17P17021 662 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 RCC1P18754 421 aaPredicted RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 STOMP27105 288 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 SLC26A3P40879 764 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 CX3CR1P49238 355 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 RPS21P63220 83 aaKnown RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 ADARB1P78563 741 aaKnown RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 ECH1Q13011 328 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 SELENBP1Q13228 472 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 TMEM255AQ5JRV8 349 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 COA6Q5JTJ3 125 aaKnown RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 TMEM53Q6P2H8 277 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 CLEC2AQ6UVW9 174 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 ZNF621Q6ZSS3 439 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 EIF3MQ7L2H7 374 aaKnown RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 OFCC1Q8IZS5 231 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 COMMD1Q8N668 190 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 OR10R2Q8NGX6 335 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 AGR3Q8TD06 166 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 C8orf44Q96CB5 159 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 AURKBQ96GD4 344 aaPredicted RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 SMIM10Q96HG1 83 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 PKNOX2Q96KN3 472 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 ECSITQ9BQ95 431 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 CLMPQ9H6B4 373 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 C20orf96Q9NUD7 363 aaPredicted RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 DDX18Q9NVP1 670 aaKnown RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 SLC25A37Q9NYZ2 338 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 NUFIP1Q9UHK0 495 aaKnown RBP2.53□□□□□ -2
RNU6-28P-201ENST00000362378 TRAPPC4Q9Y296 219 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 NOTCH3Q9UM47 2321 aa2.53□□□□□ -2
RNU6-28P-201ENST00000362378 PDS5BQ9NTI5 1447 aa2.52□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZNF318Q5VUA4 2279 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms