RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 A4GNTQ9UNA3 340 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 NTNG1Q9Y2I2 539 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 ZNF99A8MXY4 864 aaPredicted RBP8.2□□□□□ -1.1
UPF2-202ENST00000357604 TRMUO75648 421 aaKnown RBP8.2□□□□□ -1.1
UPF2-202ENST00000357604 ABHD16AO95870 558 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 GASTP01350 101 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 CST2P09228 141 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 LIPAP38571 399 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 CAPZA1P52907 286 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 CXorf67Q86X51 503 aaPredicted RBP8.2□□□□□ -1.1
UPF2-202ENST00000357604 SLC7A6OSQ96CW6 309 aaPredicted RBP8.2□□□□□ -1.1
UPF2-202ENST00000357604 SYNPO2LQ9H987 977 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 ELL3Q9HB65 397 aaPredicted RBP8.2□□□□□ -1.1
UPF2-202ENST00000357604 HRH3Q9Y5N1 445 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 A0A087WXM4 84 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 NKX6-3A6NJ46 265 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 ZIC3O60481 467 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 RFPL3SP0C7P2 107 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 PTAFRP25105 342 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 PSMA1P25786 263 aaKnown RBP8.19□□□□□ -1.1
UPF2-202ENST00000357604 ACAA2P42765 397 aaKnown RBP8.19□□□□□ -1.1
UPF2-202ENST00000357604 MZT2AQ6P582 158 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 CREB3L2Q70SY1 520 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 RBM45Q8IUH3 476 aaKnown RBP8.19□□□□□ -1.1
UPF2-202ENST00000357604 AMER2Q8N7J2 671 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 OR52N5Q8NH56 324 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 DUS3LQ96G46 650 aaKnown RBP8.19□□□□□ -1.1
UPF2-202ENST00000357604 YIPF3Q9GZM5 350 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 GPR35Q9HC97 309 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 A0A1W2PPH5 198 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 ZNF879B4DU55 563 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 LOC110117498-PIK3R3F6TDL0 507 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 IGHV3-9P01782 118 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 CD8BP10966 210 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 WT1P19544 449 aaPredicted RBP8.19□□□□□ -1.1
UPF2-202ENST00000357604 TBPL2Q6SJ96 375 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 PARP8Q8N3A8 854 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 CRLF2Q9HC73 371 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 KLF2Q9Y5W3 355 aaPredicted RBP8.19□□□□□ -1.1
UPF2-202ENST00000357604 EML5Q05BV3 1969 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 NPIPB9F8W1W9 429 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 T-ENOLP0DO92 83 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 HTR2AP28223 471 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 ZNF83P51522 516 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 UGT2A3Q6UWM9 527 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 ZNF620Q6ZNG0 422 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 RGCCQ9H4X1 137 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 ZNF254O75437 659 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 GLI4P10075 376 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 PRKACGP22612 351 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 CLDN20P56880 219 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 SORDQ00796 357 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 VHLLQ6RSH7 139 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 SLC16A9Q7RTY1 509 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 C1orf87Q8N0U7 546 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 SPERTQ8NA61 448 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 OR13C3Q8NGS6 347 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 ENPP5Q9UJA9 477 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 DHDHQ9UQ10 334 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 RNF6Q9Y252 685 aa8.19□□□□□ -1.1
UPF2-202ENST00000357604 TCRBV5S2A0A599 114 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ZNF593O00488 134 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 SORBS2O94875 1100 aaKnown RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 PSMB9P28065 219 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 AGTR1P30556 359 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 NAA10P41227 235 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 MS4A2Q01362 244 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 NXNL2Q5VZ03 156 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ABHD4Q8TB40 342 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 DIRC2Q96SL1 478 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 A0A087WUU8 490 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 PINLYPA6NC86 204 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 MAGEA13PA6NCF6 341 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ZNF878C9JN71 531 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 F5H5K5 113 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 SLC25A1P53007 311 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 IGFBP7Q16270 282 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ELFN2Q5R3F8 820 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ASRGL1Q7L266 308 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 CCDC71Q8IV32 467 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 C20orf196Q8IYI0 205 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 OR51G2Q8NGK0 314 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 CCL19Q99731 98 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 SSR3Q9UNL2 185 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ACOD1A6NK06 481 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ANKRD65E5RJM6 399 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 IDH3GP51553 393 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 FUT5Q11128 374 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 DACH2Q96NX9 599 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 SLX1AQ9BQ83 275 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 MBD3L4A6NDZ8 208 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 MBD3L3A6NE82 208 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 MBD3L5A6NJ08 208 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 J3QLW9 94 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 LYZL6O75951 148 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 STSP08842 583 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 CELA3AP09093 270 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ZNF19P17023 458 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 LAPTM4AQ15012 233 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms