RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 OR13C2Q8NGS9 318 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 ZNRF4Q8WWF5 429 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 CSAG2Q9Y5P2 127 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 TRBV11-1A0A0K0K1C0 115 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 M0QZQ0 153 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 XRCC3O43542 346 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 TPOP07202 933 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 CLDN20P56880 219 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 PDZD11Q5EBL8 140 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 SYT9Q86SS6 491 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 TCTE3Q8IZS6 198 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 ATOH8Q96SQ7 321 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 KCNJ15Q99712 375 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 ULBP2Q9BZM5 246 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 MTCH1Q9NZJ7 389 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 C5AR2Q9P296 337 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 ACTL7AQ9Y615 435 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 C3P01024 1663 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 ZNF727A8MUV8 499 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 SRMP19623 302 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 EPHA5P54756 1037 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.87□□□□□ -0.517e-9■■■■■ 49
SMC4-202ENST00000357388 MMP21Q8N119 569 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 UBTD2Q8WUN7 234 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 NEIL2Q969S2 332 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 TVP23CQ96ET8 276 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 PCYT2Q99447 389 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 SPNS1Q9H2V7 528 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 SNX11Q9Y5W9 270 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 A0A1B0GUH1 482 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 E5RGE8 158 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 BCAT2O15382 392 aaPredicted RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 CHRM4P08173 479 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 GABRA2P47869 451 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 MRPL19P49406 292 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 VEGFBP49765 207 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 SUB1P53999 127 aaKnown RBP eCLIP11.87□□□□□ -0.515e-10■■■■■ 33.9
SMC4-202ENST00000357388 TIGITQ495A1 244 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 ZNF765Q7L2R6 523 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 SLC38A6Q8IZM9 456 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 TMEM217Q8N7C4 229 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 OR5AR1Q8NGP9 310 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 MRPL38Q96DV4 380 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 C3orf30Q96M34 536 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 VAMP8Q9BV40 100 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 LRIT1Q9P2V4 623 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 KIR2DS1A0A191URI9 304 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 CPMP14384 443 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 USF1P22415 310 aaPredicted RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 FCER1GP30273 86 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 CD80P33681 288 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 KIR2DS4P43632 304 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 ZNF140P52738 457 aaPredicted RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 KIR2DS1Q14954 304 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 OR2T2Q6IF00 324 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 GPRIN1Q7Z2K8 1008 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 LILRA2Q8N149 483 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 ATOH1Q92858 354 aaPredicted RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 SOX7Q9BT81 388 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 NUDT9Q9BW91 350 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 ZNF768Q9H5H4 540 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 M0QYG6 137 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 TUSC2O75896 110 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 PMP2P02689 132 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 ALDOCP09972 364 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 SMIM18P0DKX4 95 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 OR1D4P47884 311 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 UBE2IP63279 158 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 NTHL1P78549 312 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 C17orf107Q6ZR85 190 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 OR51A2Q8NGJ7 313 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 DUOX1Q9NRD9 1551 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 RFPL4AA6NLU0 287 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 RFPL4AL1F8VTS6 287 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 SGK494L7N484 410 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 LIPAP38571 399 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 CSNK1DP48730 415 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 OR10A3P58181 314 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 REEP5Q00765 189 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 SSBP1Q04837 148 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 KDM4DQ6B0I6 523 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 TMEM178AQ8NBL3 297 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 OR14A16Q8NHC5 309 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 RAB18Q9NP72 206 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
SMC4-202ENST00000357388 TAS2R5Q9NYW4 299 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 KCMF1Q9P0J7 381 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 KCND3Q9UK17 655 aa11.87□□□□□ -0.51
SMC4-202ENST00000357388 C4orf47A7E2U8 309 aa11.86□□□□□ -0.51
SMC4-202ENST00000357388 ACOT8O14734 319 aa11.86□□□□□ -0.51
SMC4-202ENST00000357388 ADH4P08319 380 aa11.86□□□□□ -0.51
SMC4-202ENST00000357388 ZNF93P35789 620 aaPredicted RBP11.86□□□□□ -0.51
SMC4-202ENST00000357388 PGGT1BP53609 377 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms