RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 IGLV1-36A0A0B4J1U3 117 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 TRGV5A0A0B4J1U4 118 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF726A6NNF4 738 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 MKRN2OSH3BPM6 223 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF701M0R085 212 aaPredicted RBP12.15□□□□□ -0.47
HOXA1-202ENST00000355633 IGHG1P01857 330 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 TMBIM6P55061 237 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 CLDN17P56750 224 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 SRYQ05066 204 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 GALEQ14376 348 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF169Q14929 603 aaPredicted RBP12.15□□□□□ -0.47
HOXA1-202ENST00000355633 CNPY1Q3B7I2 92 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 LRRC69Q6ZNQ3 347 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 CREB3L2Q70SY1 520 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 ANKRD13BQ86YJ7 626 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 OR9K2Q8NGE7 335 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 GATAD2BQ8WXI9 593 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 ROBO4Q8WZ75 1007 aa12.15□□□□□ -0.47
HOXA1-202ENST00000355633 SF3B5Q9BWJ5 86 aaKnown RBP12.15□□□□□ -0.47
HOXA1-202ENST00000355633 MRPL13Q9BYD1 178 aaKnown RBP12.15□□□□□ -0.47
HOXA1-202ENST00000355633 ALPK2Q86TB3 2170 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 A0A1W2PQL4 384 aaPredicted RBP12.14□□□□□ -0.47
HOXA1-202ENST00000355633 TVP23AA6NH52 213 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 PGA4P0DJD7 388 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 PGA3P0DJD8 388 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 TGFBR2P37173 567 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 CD79BP40259 229 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 CENPAP49450 140 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 BLVRAP53004 296 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 CLRN1P58418 232 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 RPS3AP61247 264 aaKnown RBP12.14□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF85Q03923 595 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 FMODQ06828 376 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 MLLT11Q13015 90 aaPredicted RBP12.14□□□□□ -0.47
HOXA1-202ENST00000355633 CAMK2DQ13557 499 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 TSTQ16762 297 aaKnown RBP12.14□□□□□ -0.47
HOXA1-202ENST00000355633 VASNQ6EMK4 673 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 TMPRSS11AQ6ZMR5 421 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 SLC16A9Q7RTY1 509 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 P2RY8Q86VZ1 359 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
HOXA1-202ENST00000355633 TIGD4Q8IY51 512 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 NOXO1Q8NFA2 376 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF845Q96IR2 970 aaPredicted RBP12.14□□□□□ -0.47
HOXA1-202ENST00000355633 OPALINQ96PE5 141 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 RBP7Q96R05 134 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 ENPP5Q9UJA9 477 aa12.14□□□□□ -0.47
HOXA1-202ENST00000355633 GPANK1O95872 356 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 HLA-DQA2P01906 255 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 PDGFAP04085 211 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 SCG5P05408 212 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 RGS6P49758 472 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 HCCSP53701 268 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ETFDHQ16134 617 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 CARD17Q5XLA6 110 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ABLIM2Q6H8Q1 611 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF322Q6U7Q0 402 aaPredicted RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF485Q8NCK3 441 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 SPRYD4Q8WW59 207 aaPredicted RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF385AQ96PM9 386 aaKnown RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 DOK1Q99704 481 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ARHGAP9Q9BRR9 750 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 PAQR5Q9NXK6 330 aaPredicted RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ZFHX4Q86UP3 3567 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 LOC400499M0QZD8 3231 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 H3BMQ9 156 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 CCRL2O00421 344 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 KHDRBS3O75525 346 aaKnown RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 NR4A1P22736 598 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 TMPRSS3P57727 454 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 GLO1Q04760 184 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 THEM4Q5T1C6 240 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 Q6ZS92 163 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 SLC16A12Q6ZSM3 486 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 FCRLAQ7L513 359 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 SSX6Q7RTT6 188 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 RFLNBQ8N5W9 214 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 OR6N2Q8NGY6 317 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 FNDC8Q8TC99 324 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 FOXN4Q96NZ1 517 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 INTS14Q96SY0 518 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 MARCH7Q9H992 704 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 ISYNA1Q9NPH2 558 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 COA3Q9Y2R0 106 aaPredicted RBP12.13□□□□□ -0.47
HOXA1-202ENST00000355633 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 APC2O95996 2303 aa12.13□□□□□ -0.47
HOXA1-202ENST00000355633 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 ZNF670-ZNF695F2Z2N8 137 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
HOXA1-202ENST00000355633 CYTIPO60759 359 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 GABARAPO95166 117 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 UCNP55089 124 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 HSF2Q03933 536 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 FAM122AQ96E09 287 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 MRPL48Q96GC5 212 aaKnown RBP12.12□□□□□ -0.47
HOXA1-202ENST00000355633 TIMP4Q99727 224 aa12.12□□□□□ -0.47
HOXA1-202ENST00000355633 TTTY10Q9BZA0 68 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms