RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 DHPSP49366 369 aaPredicted RBP11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 TPBGQ13641 420 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 DEFB110Q30KQ9 67 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 FAM71E1Q6IPT2 247 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 NUP188Q5SRE5 1749 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 FABP5Q01469 135 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 RAB30Q15771 203 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 NPSR1Q6W5P4 371 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF836Q6ZNA1 936 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR1J1Q8NGS3 322 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 ADOQ96SZ5 270 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 RBM38Q9H0Z9 239 aaKnown RBP11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 PLK3Q9H4B4 646 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 LHX3Q9UBR4 397 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 EMC9Q9Y3B6 208 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 A0A1B0GWA3 101 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 CYB5BO43169 146 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 HBQ1P09105 142 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 CD37P11049 281 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 FGF7P21781 194 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 ACKR3P25106 362 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC6A11P48066 632 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 C1orf61Q13536 156 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 ENDOGQ14249 297 aaKnown RBP11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 PLPP7Q8NBV4 271 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 AMDHD1Q96NU7 426 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 RNF150Q9ULK6 438 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 YKT6O15498 198 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR1D4P47884 311 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 SSBP1Q04837 148 aaKnown RBP11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 MEP1BQ16820 701 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 SMIM15Q7Z3B0 74 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR5L1Q8NGL2 311 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 PIGCQ92535 297 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 TM4SF18Q96CE8 201 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 SEH1LQ96EE3 360 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 PDCD1LG2Q9BQ51 273 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 MS4A8Q9BY19 250 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 CSF2RAP15509 400 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 FCGR2CP31995 323 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 EPHA5P54756 1037 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC7A9P82251 487 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 USP51Q70EK9 711 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 KLHDC1Q8N7A1 406 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC46A1Q96NT5 459 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 MACROD1Q9BQ69 325 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF251Q9BRH9 671 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 CABLES2Q9BTV7 478 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 KLF16Q9BXK1 252 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 MPPED1O15442 326 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 IL5P05113 134 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR4E1P0C645 316 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 RAB5AP20339 215 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TSFMP43897 325 aaKnown RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 FOXK1P85037 733 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 VAMP3Q15836 100 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF684Q5T5D7 378 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 LKAAEAR1Q8TD35 194 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TIMM29Q9BSF4 260 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 GLIPR2Q9H4G4 154 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZMAT3Q9HA38 289 aaKnown RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 FAM96BQ9Y3D0 163 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 COL2A1P02458 1487 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 SERINC4A6NH21 518 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMX2-CTNND1H3BSU7 103 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TBPP20226 339 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 RABIFP47224 123 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 RAB13P51153 203 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 GPR85P60893 370 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR5K2Q8NHB8 316 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 ARHGAP9Q9BRR9 750 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 NKX2-4Q9H2Z4 354 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC25A19Q9HC21 320 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF331Q9NQX6 463 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 LRRC37A3O60309 1634 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC5A10A0PJK1 596 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 PHOX2AO14813 284 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 NQO2P16083 231 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 MMP15P51511 669 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 LCN6P62502 163 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 COMMD1Q8N668 190 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR2A14Q96R47 310 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 UBL7Q96S82 380 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 RARRES3Q9UL19 164 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 PPT2Q9UMR5 302 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TRAV36DV7A0A075B6V5 113 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 A0A0A6YYC8 382 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR52A4PA6NMU1 304 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 I3L1I5 382 aaPredicted RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 P2RY10O00398 339 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 YY2O15391 372 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 C1SP09871 688 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TIMP2P16035 220 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 SUMO1P63165 101 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms