RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TOR2AQ5JU69 321 aa17.71■□□□□ 0.43
COL13A1-201ENST00000354547 MDGA2Q7Z553 956 aa17.71■□□□□ 0.43
COL13A1-201ENST00000354547 CCDC28AQ8IWP9 274 aa17.71■□□□□ 0.43
COL13A1-201ENST00000354547 OR4D10Q8NGI6 311 aa17.71■□□□□ 0.43
COL13A1-201ENST00000354547 SORCS2Q96PQ0 1159 aa17.71■□□□□ 0.43
COL13A1-201ENST00000354547 CDV3Q9UKY7 258 aaKnown RBP17.71■□□□□ 0.43
COL13A1-201ENST00000354547 FREM3P0C091 2139 aa17.71■□□□□ 0.42
COL13A1-201ENST00000354547 ANKRD20A5PA0PJZ0 165 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 CDC40O60508 579 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL13A1-201ENST00000354547 KDM4BO94953 1096 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 MYF5P13349 255 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 CCR5P51681 352 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 RAG2P55895 527 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 PSMA6P60900 246 aaKnown RBP17.7■□□□□ 0.42
COL13A1-201ENST00000354547 GRK1Q15835 563 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 METTL11BQ5VVY1 283 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 KCTD20Q7Z5Y7 419 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 DVL3Q92997 716 aaPredicted RBP17.7■□□□□ 0.42
COL13A1-201ENST00000354547 HGDQ93099 445 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 NUDT9Q9BW91 350 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 LANCL2Q9NS86 450 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 CUTCQ9NTM9 273 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 C2orf72A6NCS6 295 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 G3V3Q6 166 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 ACOT7O00154 380 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 SLC25A12O75746 678 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 OR6A2O95222 327 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 RAB40ALP0C0E4 278 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 ELOCQ15369 112 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 WDR38Q5JTN6 314 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 HLA-DQA1Q5Y7H0 255 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 SIX5Q8N196 739 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 RPS4Y2Q8TD47 263 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 RAB40AQ8WXH6 277 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 TBL1XR1Q9BZK7 514 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 OR11A1Q9GZK7 315 aa17.7■□□□□ 0.42
COL13A1-201ENST00000354547 SHISA7A6NL88 538 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 SLC16A7O60669 478 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 CALCBP10092 127 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 GABRA4P48169 554 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 COL28A1Q2UY09 1125 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.69■□□□□ 0.42
COL13A1-201ENST00000354547 CHMP1BQ7LBR1 199 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 PLPP7Q8NBV4 271 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 GPR148Q8TDV2 347 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 ZNF578Q96N58 590 aaPredicted RBP17.69■□□□□ 0.42
COL13A1-201ENST00000354547 PLEKHA1Q9HB21 404 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 TRAV18A0A075B6X5 111 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 PYCARD-AS1I3L0S3 204 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 M0R233 179 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 KIR3DL2P43630 455 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 ARL4DP49703 201 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 PUDPQ08623 228 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 MELKQ14680 651 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 NSDHLQ15738 373 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 OR7E24Q6IFN5 339 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 ZNF227Q86WZ6 799 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 SUN5Q8TC36 379 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 CCDC120Q96HB5 630 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 TAS2R5Q9NYW4 299 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 EFNA3P52797 238 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 C16orf47Q6ZP98 133 aaPredicted RBP17.69■□□□□ 0.42
COL13A1-201ENST00000354547 CMTM3Q96MX0 182 aa17.69■□□□□ 0.42
COL13A1-201ENST00000354547 RBBP9O75884 186 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 ZNF250P15622 560 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 EEF1A1P5Q5VTE0 462 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 ADAMTS18Q8TE60 1221 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 ELMOD3Q96FG2 381 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 SLC46A1Q96NT5 459 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 RBP7Q96R05 134 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 OR1F2PQ96R84 312 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 GINS4Q9BRT9 223 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 GLTPQ9NZD2 209 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 TRBV5-5A0A0J9YX44 114 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 MPZL1O95297 269 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 TGM6O95932 706 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 ACKR1Q16570 336 aa17.68■□□□□ 0.42
COL13A1-201ENST00000354547 GLDNQ6ZMI3 551 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-201ENST00000354547 THAP3Q8WTV1 239 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-201ENST00000354547 CREBL2O60519 120 aaPredicted RBP17.67■□□□□ 0.42
COL13A1-201ENST00000354547 RGS11O94810 467 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 GLSO94925 669 aaPredicted RBP17.67■□□□□ 0.42
COL13A1-201ENST00000354547 PNPP00491 289 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 ITGA5P08648 1049 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 POU3F4P49335 361 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 ARPC4P59998 168 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 PLCXD2Q0VAA5 305 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 COMMD7Q86VX2 200 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 PMEPA1Q969W9 287 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 UBQLN2Q9UHD9 624 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 STEAP1Q9UHE8 339 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 A0A1B0GUH1 482 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 NAP1L6A6NFF2 107 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 SMAD9O15198 467 aaKnown RBP17.67■□□□□ 0.42
COL13A1-201ENST00000354547 WNT11O96014 354 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 IFNA7P01567 189 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 APEHP13798 732 aaKnown RBP17.67■□□□□ 0.42
COL13A1-201ENST00000354547 FASLGP48023 281 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 OR1D5P58170 312 aa17.67■□□□□ 0.42
COL13A1-201ENST00000354547 SDR16C5Q8N3Y7 309 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms