RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLC25A38Q96DW6 304 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 WBP1Q96G27 269 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 OR1F2PQ96R84 312 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 LMF2Q9BU23 707 aaKnown RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF426Q9BUY5 554 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 NUDT9Q9BW91 350 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 TMEM27Q9HBJ8 222 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 NPDC1Q9NQX5 325 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 CHRNA9Q9UGM1 479 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 MAB21L2Q9Y586 359 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 CEP250Q9BV73 2442 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 IGLV3-12A0A075B6K2 115 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 A0A1B0GWA3 101 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CDC14CA4D256 554 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ACOD1A6NK06 481 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 IFITM5A6NNB3 132 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 C4orf47A7E2U8 309 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 C17orf51A8MQB3 221 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 IDSB3KWA1 339 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CDK2AP1O14519 115 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 GATBO75879 557 aaKnown RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 IFNGP01579 166 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 EDNRAP25101 427 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 SLC6A6P31641 620 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 GPR143P51810 404 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CLDN12P56749 244 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 SKP1P63208 163 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 FAM69AQ5T7M9 428 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 FAAP20Q6NZ36 180 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ARHGAP11AQ6P4F7 1023 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 RPL22L1Q6P5R6 122 aaKnown RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 APOOLQ6UXV4 268 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 C16orf47Q6ZP98 133 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 FCRLAQ7L513 359 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CHMP1BQ7LBR1 199 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 PPP1R3BQ86XI6 285 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF614Q8N883 585 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 UXS1Q8NBZ7 420 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CNN2Q99439 309 aaKnown RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 KLHDC3Q9BQ90 382 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 SEC22CQ9BRL7 303 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 C1QTNF6Q9BXI9 259 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 OR8D2Q9GZM6 311 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 SLC25A18Q9H1K4 315 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 NANSQ9NR45 359 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CA10Q9NS85 328 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 PIPOXQ9P0Z9 390 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ICAM5Q9UMF0 924 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 COPS3Q9UNS2 423 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 BAIAP2Q9UQB8 552 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ADAM18Q9Y3Q7 739 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 EXPH5Q8NEV8 1989 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 A0A087WV48 116 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 MCIDASD6RGH6 385 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 GABARAPH6UMI1 98 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 PSMD9O00233 223 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 GNB5O14775 395 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ARPC1BO15143 372 aaKnown RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 SELENOFO60613 162 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF354AO60765 605 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ALDOBP05062 364 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 FGF5P12034 268 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 DPP4P27487 766 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ACAA2P42765 397 aaKnown RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 RAD52P43351 418 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 DUSP3P51452 185 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 RAB14P61106 215 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 RPS15P62841 145 aaKnown RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ALG10BQ5I7T1 473 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 SLC25A25Q6KCM7 469 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 UNQ9370/PRO34162Q6UXP9 181 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 GPAT4Q86UL3 456 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CDH24Q86UP0 819 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ADGRG3Q86Y34 549 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 NAXDQ8IW45 347 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 C9orf40Q8IXQ3 194 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 SLC35F2Q8IXU6 374 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 GALNT11Q8NCW6 608 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 OR4C3Q8NH37 302 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ADAMTS18Q8TE60 1221 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF524Q96C55 264 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 WDR89Q96FK6 387 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 CMTM3Q96MX0 182 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 STACQ99469 402 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 EDEM2Q9BV94 578 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 COL25A1Q9BXS0 654 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 RTN4RQ9BZR6 473 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 NXF5Q9H1B4 397 aaKnown RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 LIN7BQ9HAP6 207 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 PLEKHA1Q9HB21 404 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 EMC3Q9P0I2 261 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 FKBP7Q9Y680 259 aa7.79□□□□□ -1.16
TRIM55-204ENST00000353317 PTPRZ1P23471 2315 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-204ENST00000353317 PCSK5Q92824 1860 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 A0A1B0GUH1 482 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 AIPO00170 330 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 PRAF2O60831 178 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 RGS11O94810 467 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 CXCL2P19875 107 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 PTH2RP49190 550 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms