RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DLSTP36957 453 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 CARD18P57730 90 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 MZT1Q08AG7 82 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ARIH2OSQ8N7S6 290 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NRSN2Q9GZP1 204 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 SCPEP1Q9HB40 452 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 SOCS6O14544 535 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 VAMP1P23763 118 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 EMDP50402 254 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 POU4F3Q15319 338 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 AAED1Q7RTV5 226 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NLGN4XQ8N0W4 816 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NLGN4YQ8NFZ3 816 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 OR5L1Q8NGL2 311 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF681Q96N22 645 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 CLCC1Q96S66 551 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 C12orf57Q99622 126 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ALG1L2C9J202 215 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NRG2O14511 850 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 MRPL33O75394 65 aaKnown RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 CBX7O95931 251 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 FUT7Q11130 342 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 Q3ZCU0 254 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ANKRD34AQ69YU3 496 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 HBMQ6B0K9 141 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ACSM5Q6NUN0 579 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 Q7L0L9 218 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 SLC22A18ASQ8N1D0 253 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NRIP3Q9NQ35 241 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NUFIP1Q9UHK0 495 aaKnown RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 FAM171A2A8MVW0 826 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 GYPBP06028 91 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 FCER2P06734 321 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 UBCP0CG48 685 aaKnown RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 PGAM2P15259 253 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 APLNRP35414 380 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ABCA11PQ4W5N1 156 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 PRAMEF20Q5VT98 475 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 OR5M10Q6IEU7 315 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 FAM198BQ6UWH4 519 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 MFSD8Q8NHS3 518 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 PCNPQ8WW12 178 aaKnown RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 THOC3Q96J01 351 aaKnown RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NEDD4LQ96PU5 975 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ACAD8Q9UKU7 415 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 KCNE3Q9Y6H6 103 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 IGHV3-20A0A0C4DH32 117 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 KDM4EB2RXH2 506 aaPredicted RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ANKRD34CP0C6C1 535 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 GRB2P62993 217 aaKnown RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 Q499Y3 187 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ZSCAN4Q8NAM6 433 aaPredicted RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 SIMC1Q8NDZ2 872 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 OR4Q3Q8NH05 313 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM269A0A1B0GVZ9 245 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF878C9JN71 531 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 MT-CO3P00414 261 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 THBS2P35442 1172 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 CASP3P42574 277 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 MC2RQ01718 297 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 SEMA4CQ9C0C4 833 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 TXNIPQ9H3M7 391 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 MOB1AQ9H8S9 216 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 C14orf166Q9Y224 244 aaKnown RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 D6RAR5 112 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 FCGR2AP12318 317 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 CPEP16870 476 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 BIDP55957 195 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 CLDN17P56750 224 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 VAMP2P63027 116 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 SRYQ05066 204 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ALKBH1Q13686 389 aaKnown RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF674Q2M3X9 581 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 OR2G6Q5TZ20 316 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 RFPL4BQ6ZWI9 263 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ARL6Q9H0F7 186 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF700Q9H0M5 742 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 WDR54Q9H977 334 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 TXNL4BQ9NX01 149 aaKnown RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 DNAJB12Q9NXW2 375 aaKnown RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 PLEK2Q9NYT0 353 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 EEF1E1O43324 174 aaKnown RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 MAS1P04201 325 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 SPNP16150 400 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 SLC2A5P22732 501 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ZFP36L2P47974 494 aaKnown RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 CDK5Q00535 292 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 PLEKHN1Q494U1 663 aaPredicted RBP11.09□□□□□ -0.63
SMAD9-201ENST00000350148 ESCO2Q56NI9 601 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 NKAPLQ5M9Q1 402 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 C17orf47Q8NEP4 570 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 CLDN23Q96B33 292 aa11.09□□□□□ -0.63
SMAD9-201ENST00000350148 A0A1W2PR77 199 aa11.08□□□□□ -0.64
SMAD9-201ENST00000350148 GGT3PA6NGU5 568 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms