RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ZMYND19Q96E35 227 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 C14orf79Q96F83 325 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 SLC35A4Q96G79 324 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 TAAR9Q96RI9 348 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 MNTQ99583 582 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 TIMM29Q9BSF4 260 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 TMEM231Q9H6L2 316 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 TUBA4BQ9H853 241 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 SYNPO2LQ9H987 977 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 SERTAD3Q9UJW9 196 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 WDR45Q9Y484 360 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 WNT6Q9Y6F9 365 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 TEX13DA0A0J9YY54 714 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 RHPN2P1A8MT19 583 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 IDSB3KWA1 339 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 C1QTNF3-AMACRE9PGA6 284 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 FCMRO60667 390 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 CTAG2O75638 210 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 FARS2O95363 451 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 WNT11O96014 354 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 AK1P00568 194 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 KLK3P07288 261 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 CD14P08571 375 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PRSS3P35030 304 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 HTR5AP47898 357 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 CAV2P51636 162 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 TAS2R19P59542 299 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 HTRA4P83105 476 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 DEFA6Q01524 100 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 GUCA2AQ02747 115 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 DUSP2Q05923 314 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 DHRS2Q13268 280 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 NKAIN2Q5VXU1 208 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 FAM111BQ6SJ93 734 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 UNQ6126/PRO20091Q6UXV3 157 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF227Q86WZ6 799 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 ARL14Q8N4G2 192 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 TMEM229BQ8NBD8 167 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 OR1J2Q8NGS2 313 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PHOSPHO2Q8TCD6 241 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 GPX8Q8TED1 209 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 ING5Q8WYH8 240 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 SAT2Q96F10 170 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PFDN5Q99471 154 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 KLHL31Q9H511 634 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 STEAP1Q9UHE8 339 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 A0A0G2JN53 185 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 GLOD5A6NK44 160 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF705EA8MWA4 302 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 AP4M1O00189 453 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PRKRAO75569 313 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 ZFPL1O95159 310 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC6A6P31641 620 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PTGER1P34995 402 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PRKXP51817 358 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 F2RL1P55085 397 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 HGFACQ04756 655 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PLA2G7Q13093 441 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 Q499Y3 187 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 LRRC37A5PQ49AS3 106 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 FNDC3BQ53EP0 1204 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 FAM76BQ5HYJ3 339 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 ATPAF1Q5TC12 328 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PLPP4Q5VZY2 271 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 OR10K2Q6IF99 312 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 TMPRSS12Q86WS5 348 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 ANGPTL5Q86XS5 388 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 LRRC25Q8N386 305 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 OR9A2Q8NGT5 310 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 NUDCD2Q8WVJ2 157 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 GAL3ST3Q96A11 431 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 MALSU1Q96EH3 234 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 RBM18Q96H35 190 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 CLCC1Q96S66 551 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 NAA11Q9BSU3 229 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 FKRPQ9H9S5 495 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 TRPV4Q9HBA0 871 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 RHOFQ9HBH0 211 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 POLE3Q9NRF9 147 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 DZANK1Q9NVP4 752 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 NOP16Q9Y3C1 178 aaKnown RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 MED31Q9Y3C7 131 aa9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 PCYT1BQ9Y5K3 369 aaPredicted RBP9.39□□□□□ -0.91
CHRNA1-202ENST00000348749 NUP210LQ5VU65 1888 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 TRAV27A0A087WT01 109 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 TRBV6-7A0A0A0MS04 114 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 TRBV5-5A0A0J9YX44 114 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 ARGFXA6NJG6 315 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 MFNGO00587 321 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 PPM1DO15297 605 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 SRPX2O60687 465 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 RAB3DO95716 219 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 RHOP08100 348 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 SFTA3P0C7M3 94 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 ZNF14P17017 642 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 CMPK1P30085 196 aa9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 NAA10P41227 235 aaPredicted RBP9.38□□□□□ -0.91
CHRNA1-202ENST00000348749 MAGEB1P43366 347 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms