RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CCDC36Q8IYA8 594 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 NUP37Q8NFH4 326 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 GEMIN6Q8WXD5 167 aaKnown RBP12.49□□□□□ -0.41
HMGN3-202ENST00000344726 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF347Q96SE7 839 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 SEPHS2Q99611 448 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 MRPL13Q9BYD1 178 aaKnown RBP12.49□□□□□ -0.41
HMGN3-202ENST00000344726 NSRP1Q9H0G5 558 aaKnown RBP12.49□□□□□ -0.41
HMGN3-202ENST00000344726 MOV10Q9HCE1 1003 aaKnown RBP12.49□□□□□ -0.41
HMGN3-202ENST00000344726 INIPQ9NRY2 104 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 MALRD1Q5VYJ5 2156 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 DHHO43323 396 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
HMGN3-202ENST00000344726 QDPRP09417 244 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 OR4A8P0C604 315 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 IFI30P13284 250 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 THBS4P35443 961 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 SERPINF1P36955 418 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 GIPRP48546 466 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 CHRNB3Q05901 458 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 FHL1Q13642 323 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 RAB35Q15286 201 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 PIWIL3Q7Z3Z3 882 aaKnown RBP12.48□□□□□ -0.41
HMGN3-202ENST00000344726 PIGWQ7Z7B1 504 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 NRMQ8IXM6 262 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 RNF148Q8N7C7 305 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 FAM86B1Q8N7N1 296 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 SYT14Q8NB59 555 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 NOXO1Q8NFA2 376 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 OR4F15Q8NGB8 312 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 BPIFA2Q96DR5 249 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 FNDC11Q9BVV2 318 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 SPAG4Q9NPE6 437 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 TMEM38BQ9NVV0 291 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 HIF3AQ9Y2N7 669 aa12.48□□□□□ -0.41
HMGN3-202ENST00000344726 A0A087WUU8 490 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 MCIDASD6RGH6 385 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 IGHG1P01857 330 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF35P13682 527 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 PTDSS1P48651 473 aaKnown RBP12.47□□□□□ -0.41
HMGN3-202ENST00000344726 CLRN1P58418 232 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 RAB1AP62820 205 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 PRKCDQ05655 676 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 TRAM2Q15035 370 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 MSMPQ1L6U9 139 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 TBPL2Q6SJ96 375 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 FKBP9P1Q75LS8 142 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 C10orf105Q8TEF2 133 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 HDAC2Q92769 488 aaKnown RBP12.47□□□□□ -0.41
HMGN3-202ENST00000344726 FAM162AQ96A26 154 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 NMD3Q96D46 503 aaKnown RBP12.47□□□□□ -0.41
HMGN3-202ENST00000344726 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 PLK3Q9H4B4 646 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF442Q9H7R0 627 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 PMF1-BGLAPU3KQ54 211 aa12.47□□□□□ -0.41
HMGN3-202ENST00000344726 TRAV27A0A087WT01 109 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 TMEM129A0AVI4 362 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 B9A039 149 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 NDUFAB1O14561 156 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 CD5LO43866 347 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 PDE5AO76074 875 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 UBL3O95164 117 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 SLC2A10O95528 541 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 ACADSP16219 412 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 DAP3P51398 398 aaKnown RBP12.46□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF133P52736 654 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-202ENST00000344726 EFNA4P52798 201 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 PPP2R2BQ00005 443 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 SNTB2Q13425 540 aaKnown RBP12.46□□□□□ -0.41
HMGN3-202ENST00000344726 RAB39AQ14964 217 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 EFNB3Q15768 340 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 ALG10Q5BKT4 473 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 GLYATQ6IB77 296 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 KRT80Q6KB66 452 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 CLEC2AQ6UVW9 174 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 IGFN1Q86VF2 1251 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 ANKS4BQ8N8V4 417 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 LRRC75AQ8NAA5 344 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-202ENST00000344726 RHNO1Q9BSD3 238 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 TXNIPQ9H3M7 391 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 DCAF13Q9NV06 445 aaKnown RBP12.46□□□□□ -0.41
HMGN3-202ENST00000344726 ADA2Q9NZK5 511 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 ENPP4Q9Y6X5 453 aa12.46□□□□□ -0.41
HMGN3-202ENST00000344726 NPIPB13A6NJU9 1138 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 CENPBD1B2RD01 187 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 NPIPB4C9JG80 1138 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 CDC42EP2O14613 210 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 CRLF1O75462 422 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms