RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 HSMCR30P0CW71 290 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 CLRN1P58418 232 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 RPS3AP61247 264 aaKnown RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 MED22Q15528 200 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 ABLIM2Q6H8Q1 611 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 RFLNBQ8N5W9 214 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 OR6X1Q8NH79 312 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 C9orf43Q8TAL5 461 aaPredicted RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 ABHD3Q8WU67 409 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 NSMAFQ92636 917 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 SNX18Q96RF0 628 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 HAO2Q9NYQ3 351 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 EXOSC1Q9Y3B2 195 aaKnown RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 PTPRQQ9UMZ3 2332 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 IGLV1-36A0A0B4J1U3 117 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 ZNF716A6NP11 495 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 MYL12BO14950 172 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 IGHG1P01857 330 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 IGHA1P01876 353 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 HLA-DQA2P01906 255 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 PGA4P0DJD7 388 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 PGA3P0DJD8 388 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 GGTLC2Q14390 218 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 POU4F3Q15319 338 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 LINC00303Q3SY05 128 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 OR2G6Q5TZ20 316 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 UBE2UQ5VVX9 321 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 ZBTB46Q86UZ6 589 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 ERI1Q8IV48 349 aaKnown RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 SLC35F2Q8IXU6 374 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 NOXO1Q8NFA2 376 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 OR13F1Q8NGS4 319 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 FNDC9Q8TBE3 224 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 SLC25A44Q96H78 314 aaPredicted RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 MND1Q9BWT6 205 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 MRPL13Q9BYD1 178 aaKnown RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 ERVK13-1Q9NX77 482 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 MOKQ9UQ07 419 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 COA3Q9Y2R0 106 aaPredicted RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 LSM2Q9Y333 95 aaKnown RBP11.29□□□□□ -0.6
CT55-202ENST00000344129 FKBP7Q9Y680 259 aa11.29□□□□□ -0.6
CT55-202ENST00000344129 DNAJC13O75165 2243 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 DAPL1A0PJW8 107 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 CCDC160A6NGH7 325 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 CYTIPO60759 359 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 SEC14L2O76054 403 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 AQP8O94778 261 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 RPS27P42677 84 aaKnown RBP11.28□□□□□ -0.6
CT55-202ENST00000344129 SELENOPP49908 381 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 POU4F2Q12837 409 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 TIGD6Q17RP2 521 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
CT55-202ENST00000344129 RNLSQ5VYX0 342 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 CHMP1BQ7LBR1 199 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.28□□□□□ -0.6
CT55-202ENST00000344129 ACBD7Q8N6N7 88 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 GATAD2BQ8WXI9 593 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 RBP7Q96R05 134 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 OR2M2Q96R28 347 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 TUBA1CQ9BQE3 449 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 ARHGAP9Q9BRR9 750 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 ZNF649Q9BS31 505 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
CT55-202ENST00000344129 PRRG4Q9BZD6 226 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 WDR76Q9H967 626 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 CLEC4AQ9UMR7 237 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 BOD1L1Q8NFC6 3051 aa11.28□□□□□ -0.6
CT55-202ENST00000344129 PRRC2CQ9Y520 2896 aaKnown RBP11.27□□□□□ -0.6
CT55-202ENST00000344129 CHD8Q9HCK8 2581 aa11.27□□□□□ -0.6
CT55-202ENST00000344129 A0A1B0GTH9 108 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 A0A1W2PQL4 384 aaPredicted RBP11.27□□□□□ -0.61
CT55-202ENST00000344129 MPZL1O95297 269 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 PSKH1P11801 424 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 CPN1P15169 458 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 CRABP1P29762 137 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 NTF4P34130 210 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 ZNF85Q03923 595 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 MEP1BQ16820 701 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 PHYHD1Q5SRE7 291 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 GPR107Q5VW38 600 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 SSX6Q7RTT6 188 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 ZNF367Q7RTV3 350 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 HDDC2Q7Z4H3 204 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 CLVS1Q8IUQ0 354 aaPredicted RBP11.27□□□□□ -0.61
CT55-202ENST00000344129 POMGNT2Q8NAT1 580 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 OR5M9Q8NGP3 310 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 SNRNP27Q8WVK2 155 aaKnown RBP11.27□□□□□ -0.61
CT55-202ENST00000344129 FCGR1BQ92637 280 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 ADAD1Q96M93 576 aaKnown RBP11.27□□□□□ -0.61
CT55-202ENST00000344129 ALG8Q9BVK2 526 aa11.27□□□□□ -0.61
CT55-202ENST00000344129 NAA50Q9GZZ1 169 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms