RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ZNF587Q96SQ5 575 aaPredicted RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 STMN3Q9NZ72 180 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 ST3GAL2Q16842 350 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 GSG1Q2KHT4 349 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 WDR38Q5JTN6 314 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 FAM69AQ5T7M9 428 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 SLC22A10Q63ZE4 541 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 LRRTM1Q86UE6 522 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 PLCZ1Q86YW0 608 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 OIT3Q8WWZ8 545 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 ZNF501Q96CX3 271 aaPredicted RBP13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 C20orf85Q9H1P6 137 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 C12orf10Q9HB07 376 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 TAS2R10Q9NYW0 307 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 B9D1Q9UPM9 204 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 FOXJ3Q9UPW0 622 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 SLC22A13Q9Y226 551 aa13.44□□□□□ -0.26
VIPAS39-202ENST00000343765 PRSS37A4D1T9 235 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 SSNA1O43805 119 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 DOK2O60496 412 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 KRT33AO76009 404 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 HLA-DOBP13765 273 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 CTLA4P16410 223 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 HTR2BP41595 481 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 KIR3DL2P43630 455 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 PTH2RP49190 550 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 P2RX1P51575 399 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 AFF3P51826 1226 aaKnown RBP13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 FBXW4P57775 412 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 RPL27P61353 136 aaKnown RBP13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 GALK2Q01415 458 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 COL28A1Q2UY09 1125 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 TMPRSS9Q7Z410 1059 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 MDGA2Q7Z553 956 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 OTOSQ8NHW6 89 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 OR10A4Q9H209 315 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 KCNK15Q9H427 330 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 HRASLSQ9HDD0 168 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 KLHL9Q9P2J3 617 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 MED12Q93074 2177 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 TRBV5-5A0A0J9YX44 114 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 A0A1W2PQD3 144 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 TO15178 435 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 CTDSPLO15194 276 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 WNT11O96014 354 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 FCER2P06734 321 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 CCKBRP32239 447 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 CCR9P51686 369 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 ART1P52961 327 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 PNLIPRP2P54317 469 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 INSM1Q01101 510 aaPredicted RBP13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 DMWDQ09019 674 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 SGCBQ16585 318 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 BTN2A1Q7KYR7 527 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 GLB1L2Q8IW92 636 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 DND1Q8IYX4 353 aaKnown RBP13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 STT3BQ8TCJ2 826 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 GPR119Q8TDV5 335 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 FCAMRQ8WWV6 532 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 GON7Q9BXV9 100 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 SLC22A11Q9NSA0 550 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 TMEM14AQ9Y6G1 99 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 GABARAPH6UMI1 98 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 SOX1O00570 391 aaPredicted RBP13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 FADS1O60427 444 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 ZNF354AO60765 605 aaPredicted RBP13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 MPZL1O95297 269 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 ADAM8P78325 824 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 EGR3Q06889 387 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 OR7E24Q6IFN5 339 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 SDR16C5Q8N3Y7 309 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 SNAPC3Q92966 411 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 C4orf45Q96LM5 186 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 OR2M2Q96R28 347 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 COPZ2Q9P299 210 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 MGAT4AQ9UM21 535 aa13.43□□□□□ -0.26
VIPAS39-202ENST00000343765 TMEM212A6NML5 194 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 A8MVM7 634 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 ZNF254O75437 659 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 AHSA1O95433 338 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 HPXP02790 462 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 GIMD1P0DJR0 217 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 VEGFCP49767 419 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 RNF4P78317 190 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 DYRK1AQ13627 763 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 COX15Q7KZN9 410 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 SLC38A9Q8NBW4 561 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 MRPL22Q9NWU5 206 aaKnown RBP13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 VDAC3Q9Y277 283 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 CPED1A4D0V7 1026 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 SHISA8B8ZZ34 492 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 DCNP07585 359 aaKnown RBP13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 ANXA3P12429 323 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 DCTDP32321 178 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 TAS2R20P59543 309 aa13.42□□□□□ -0.26
VIPAS39-202ENST00000343765 GPLD1P80108 840 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms