RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CHRNA9Q9UGM1 479 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 PLXNA2O75051 1894 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 SULT2B1O00204 365 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 FGF18O76093 207 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 OR2F2O95006 317 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 PMS2P2O95744 297 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLCN1-201ENST00000343257 RAB5BP61020 215 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 TDGQ13569 410 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 OR2F1Q13607 317 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 EIF2B1Q14232 305 aaKnown RBP13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ELAVL1Q15717 326 aaKnown RBP13.53□□□□□ -0.24
CLCN1-201ENST00000343257 NKAPLQ5M9Q1 402 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 BPIFB2Q8N4F0 458 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 DCUN1D4Q92564 292 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ARL11Q969Q4 196 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 GAS2L1Q99501 681 aaPredicted RBP13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ALG12Q9BV10 488 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 ICAM5Q9UMF0 924 aa13.53□□□□□ -0.24
CLCN1-201ENST00000343257 TBC1D3KA0A087X1G2 549 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 TBC1D3BA6NDS4 549 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 TBC1D3FA6NER0 549 aaPredicted RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 NDUFB2O95178 105 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 IFNA4P05014 189 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 DBIP07108 87 aaKnown RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 ITGA5P08648 1049 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 AKR1C4P17516 323 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 CCKBRP32239 447 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 NR0B1P51843 470 aaKnown RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 PGDP52209 483 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 AIMP2Q13155 320 aaKnown RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 FHL1Q13642 323 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 ALKBH1Q13686 389 aaKnown RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 TMEM35AQ53FP2 167 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 C9orf152Q5JTZ5 239 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 TBC1D3GQ6DHY5 549 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 SFTPA1Q8IWL2 248 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 POMGNT2Q8NAT1 580 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 ISOC2Q96AB3 205 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 MRPL48Q96GC5 212 aaKnown RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 ZNF514Q96K75 400 aaPredicted RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 ZNF285Q96NJ3 590 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 CLCC1Q96S66 551 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 PCBD2Q9H0N5 130 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 UQCC1Q9NVA1 299 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 PRR13Q9NZ81 148 aa13.52□□□□□ -0.24
CLCN1-201ENST00000343257 MRM2Q9UI43 246 aaKnown RBP13.52□□□□□ -0.24
CLCN1-201ENST00000343257 TGM5O43548 720 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 WNT11O96014 354 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 DAOP14920 347 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 ADH6P28332 368 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 SDHAP31040 664 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 CENPAP49450 140 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 FABP9Q0Z7S8 132 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 INPP5JQ15735 1006 aaPredicted RBP13.52□□□□□ -0.25
CLCN1-201ENST00000343257 EXOSC6Q5RKV6 272 aaKnown RBP13.52□□□□□ -0.25
CLCN1-201ENST00000343257 TCEAL8Q8IYN2 117 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 CLEC1AQ8NC01 280 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 NPEPL1Q8NDH3 523 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 STOML3Q8TAV4 291 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 ROBO4Q8WZ75 1007 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.52□□□□□ -0.25
CLCN1-201ENST00000343257 SLC22A7Q9Y694 548 aa13.52□□□□□ -0.25
CLCN1-201ENST00000343257 GMFGO60234 142 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 PRKNO60260 465 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ID4P47928 161 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 EIF2S3LQ2VIR3 472 aaKnown RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF704Q6ZNC4 412 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ETFBKMTQ8IXQ9 262 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 OR6N2Q8NGY6 317 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 NAA11Q9BSU3 229 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 PITHD1Q9GZP4 211 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF350Q9GZX5 532 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 PARP12Q9H0J9 701 aaKnown RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 TAS2R8Q9NYW2 309 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 CGGBP1Q9UFW8 167 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 GPR34Q9UPC5 381 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 POM121BA6NF01 834 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF208O43345 1280 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 EIF1BO60739 113 aaKnown RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 LY86O95711 162 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 EIF1P41567 113 aaKnown RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ZIC1Q15915 447 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 TCEAL5Q5H9L2 206 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 KRBOX4Q5JUW0 171 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ANKRD16Q6P6B7 361 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 UQCC3Q6UW78 93 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 C5orf46Q6UWT4 87 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 OR4N2Q8NGD1 307 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 OR5AP2Q8NGF4 316 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF764Q96H86 408 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 SLC6A7Q99884 636 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 WDR77Q9BQA1 342 aaPredicted RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 C20orf24Q9BUV8 137 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 ITGB2P05107 769 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 F13BP05160 661 aa13.51□□□□□ -0.25
CLCN1-201ENST00000343257 CDKN2AP42771 156 aaKnown RBP13.51□□□□□ -0.25
CLCN1-201ENST00000343257 SRSF5Q13243 272 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms