RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 UBL4AP11441 157 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 ACHEP22303 614 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 FAUP35544 74 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 RAP2BP61225 183 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 TAF13Q15543 124 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 ETFDHQ16134 617 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 CT45A2Q5DJT8 189 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 LINC01590Q5TEZ4 76 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 ZCCHC12Q6PEW1 402 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 CD163Q86VB7 1156 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 LSMEM1Q8N8F7 131 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 OR2G2Q8NGZ5 317 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 STK35Q8TDR2 534 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 MAP3K3Q99759 626 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 SLC7A5P2Q9GIP4 190 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 MFFQ9GZY8 342 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 MRPS33Q9Y291 106 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 NAP1L6A6NFF2 107 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 XKRYO14609 159 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 S1PR1P21453 382 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 EIF1AXP47813 144 aaKnown RBP13.07□□□□□ -0.32
CPSF7-201ENST00000340437 PRPS1P60891 318 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 SPOCK1Q08629 439 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 PRAMEF17Q5VTA0 474 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 TMEM81Q6P7N7 255 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 RTL10Q7L3V2 364 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 ST8SIA4Q92187 359 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 CTHRC1Q96CG8 243 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 VSTM2LQ96N03 204 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 CMKLR1Q99788 373 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 G6PC3Q9BUM1 346 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 NPDC1Q9NQX5 325 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-201ENST00000340437 LAMA1P25391 3075 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 SCDO00767 359 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 CDC40O60508 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
CPSF7-201ENST00000340437 NDUFB6O95139 128 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 RAB40ALP0C0E4 278 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 M6PRP20645 277 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 BPHLQ86WA6 291 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-201ENST00000340437 RAB40AQ8WXH6 277 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF524Q96C55 264 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 MRGPRX1Q96LB2 322 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 TMEM185BQ9H7F4 350 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 MED11Q9P086 117 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 TCRBV21S2A2A0A5A6 115 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 PLSCR5A0PG75 271 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 FITM1A5D6W6 292 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 PRR19A6NJB7 356 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 C17orf105B2RV13 164 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 KCNAB3O43448 404 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 RENP00797 406 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 TNFP01375 233 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF28P17035 718 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 OR1D4P47884 311 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 ARL4DP49703 201 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 RAG2P55895 527 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 DLX5P56178 289 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 FOXL2P58012 376 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 TOMM34Q15785 309 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-201ENST00000340437 C2orf76Q3KRA6 126 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 DMRTC1Q5HYR2 192 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF626Q68DY1 528 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 UNQ9370/PRO34162Q6UXP9 181 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 SLC16A9Q7RTY1 509 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 FAM160A2Q8N612 972 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-201ENST00000340437 GPR148Q8TDV2 347 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 CCDC74AQ96AQ1 378 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 PLEKHA6Q9Y2H5 1048 aa13.07□□□□□ -0.32
CPSF7-201ENST00000340437 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 SLC16A7O60669 478 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 PRSS3P35030 304 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 LRFN4Q6PJG9 635 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 ARSKQ6UWY0 536 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 MARCH3Q86UD3 253 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF454Q8N9F8 522 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 CHST4Q8NCG5 386 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 FAM46BQ96A09 425 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF426Q9BUY5 554 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 IGKV1D-42A0A075B6H8 117 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 CTDSPLO15194 276 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 TNFSF14O43557 240 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 PRAMEF2O60811 474 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 UPK3AO75631 287 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 GLSO94925 669 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-201ENST00000340437 AMY2AP04746 511 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 GIPP09681 153 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-201ENST00000340437 TPMTP51580 245 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 RBMS2Q15434 407 aaKnown RBP13.06□□□□□ -0.32
CPSF7-201ENST00000340437 GSG1LQ6UXU4 331 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 CMIPQ8IY22 773 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 CASTOR1Q8WTX7 329 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 SVILO95425 2214 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 CXCR1P25024 350 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 MAPK3P27361 379 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-201ENST00000340437 CAPZA2P47755 286 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 AKR1C2P52895 323 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 AKR1C1Q04828 323 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 TSSK4Q6SA08 328 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms