RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PLCE1Q9P212 2302 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF503-AS2A6NEH8 195 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 ABCD4O14678 606 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 DHHO43323 396 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 HOXB1P14653 301 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-201ENST00000340074 B4GALT1P15291 398 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 FPR3P25089 353 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 CD40P25942 277 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 GSSP48637 474 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 CD47Q08722 323 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 ADAM5Q6NVV9 412 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 SMARCD3Q6STE5 483 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 TMEM108Q6UXF1 575 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 PAMR1Q6UXH9 720 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 FAM122BQ7Z309 247 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 CLDN22Q8N7P3 220 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 KBTBD8Q8NFY9 601 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 FANK1Q8TC84 345 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 GNPDA2Q8TDQ7 276 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 NEUROG1Q92886 237 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 SLCO4A1Q96BD0 722 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 Q96M85 177 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 NDEL1Q9GZM8 345 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 CCM2LQ9NUG4 571 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-201ENST00000340074 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 PLEKHA6Q9Y2H5 1048 aa13.31□□□□□ -0.28
UBE3B-201ENST00000340074 A6NIZ1 184 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 EBAG9O00559 213 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 CCNB2O95067 398 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 SLC2A10O95528 541 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 GASTP01350 101 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 HOXB6P17509 224 aaKnown RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 PTAFRP25105 342 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 CAPZA2P47755 286 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 RAP1BP61224 184 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 RAP1AP62834 184 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 FMODQ06828 376 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 SPOCK1Q08629 439 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 C1orf146Q5VVC0 180 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 FAM205BPQ63HN1 556 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF770Q6IQ21 691 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 LINC00471Q8N535 108 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 ARIH2OSQ8N7S6 290 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 LILRB1Q8NHL6 650 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 AKAP1Q92667 903 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 NMD3Q96D46 503 aaKnown RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF570Q96NI8 536 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 GPX7Q96SL4 187 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 ALG12Q9BV10 488 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 OR52D1Q9H346 318 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 NRIP3Q9NQ35 241 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 TMEM38BQ9NVV0 291 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 MYO9AB2RTY4 2548 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 OTOGQ6ZRI0 2925 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 CREBBPQ92793 2442 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 AKAP9Q99996 3911 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 IGKV1D-43A0A0B4J1Z2 117 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 SHISA9B4DS77 424 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 H7C1C5 153 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 ARHGEF9O43307 516 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 FKBP6O75344 327 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 RAF1P04049 648 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 SDHAP31040 664 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF133P52736 654 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 IST1P53990 364 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 LCN6P62502 163 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 MICAQ29983 383 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 RFX4Q33E94 735 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 MESTQ5EB52 335 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 C10orf128Q5T292 105 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 DPY19L2P2Q6ZN68 376 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 CCDC36Q8IYA8 594 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 SLC22A24Q8N4F4 322 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 AQP11Q8NBQ7 271 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 PAPD5Q8NDF8 572 aaKnown RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 NSMAFQ92636 917 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 HTRA1Q92743 480 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 RASD2Q96D21 266 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF224Q9NZL3 707 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 CRNNQ9UBG3 495 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-201ENST00000340074 EDARQ9UNE0 448 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 MGAT4BQ9UQ53 548 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 IER3IP1Q9Y5U9 82 aa13.3□□□□□ -0.28
UBE3B-201ENST00000340074 CCDC168Q8NDH2 2452 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 IGHV1-18A0A0C4DH31 117 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 TEX13CA0A0J9YWL9 993 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 XKRYO14609 159 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 GNGT2O14610 69 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 HS3ST1O14792 307 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 ATE1O95260 518 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 IGKV3-15P01624 115 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 HLA-HP01893 362 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 OR8G3PP0DMU2 310 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 CD79AP11912 226 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 PAX7P23759 505 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 DNASE1P24855 282 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF84P51523 738 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 PIGFQ07326 219 aa13.29□□□□□ -0.28
UBE3B-201ENST00000340074 KEAP1Q14145 624 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms