RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ERVK13-1Q9NX77 482 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 LSM2Q9Y333 95 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CEPT1Q9Y6K0 416 aa13.14□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF726A6NNF4 738 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 WISP2O76076 250 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 IGHG3P01860 377 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TFP02787 698 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 HSMCR30P0CW71 290 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CD79BP40259 229 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CENPAP49450 140 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CLRN1P58418 232 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TIGD6Q17RP2 521 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR2G6Q5TZ20 316 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 GPR107Q5VW38 600 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CARD17Q5XLA6 110 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PLXDC2Q6UX71 529 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FCRLAQ7L513 359 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CLVS1Q8IUQ0 354 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 POMGNT2Q8NAT1 580 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF775Q96BV0 537 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FOXN4Q96NZ1 517 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SF3B5Q9BWJ5 86 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 JAM3Q9BX67 310 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MRPL13Q9BYD1 178 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TP53TG5Q9Y2B4 290 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
CDK5RAP3-201ENST00000338399 IGLV1-36A0A0B4J1U3 117 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 IGKV1D-43A0A0B4J1Z2 117 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 DAPL1A0PJW8 107 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 IGHG1P01857 330 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PGA4P0DJD7 388 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PGA3P0DJD8 388 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CRABP1P29762 137 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ABLIM2Q6H8Q1 611 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NOXO1Q8NFA2 376 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 WDYHV1Q96HA8 205 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 COG8Q96MW5 612 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RBP7Q96R05 134 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 B3GNT3Q9Y2A9 372 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TMEM129A0AVI4 362 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF716A6NP11 495 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 AHCYL1O43865 530 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CYTIPO60759 359 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 HLA-DQA2P01906 255 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RASGEF1BQ0VAM2 473 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SPHARQ15513 63 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PLEKHN1Q494U1 663 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ARMCX4Q5H9R4 360 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 UNQ6494/PRO21346Q6UXR6 183 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SLC35F2Q8IXU6 374 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZIC4Q8N9L1 334 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 GATAD2BQ8WXI9 593 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 MGLLQ99685 303 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ALG8Q9BVK2 526 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 PAQR5Q9NXK6 330 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 LUZP4Q9P127 313 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CAMK2AQ9UQM7 478 aa13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 COA3Q9Y2R0 106 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-201ENST00000338399 A0A087WV48 116 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SYNGR4O95473 234 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CPN1P15169 458 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 LIPAP38571 399 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 WNT4P56705 351 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ACTC1P68032 377 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ACTA1P68133 377 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ZNF85Q03923 595 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 GALEQ14376 348 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OTPQ5XKR4 325 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 DNM1P34Q6PK57 102 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TIGD4Q8IY51 512 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 KLHL36Q8N4N3 616 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RFLNBQ8N5W9 214 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 ABHD3Q8WU67 409 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NSMAFQ92636 917 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 RACGAP1Q9H0H5 632 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 INPP5EQ9NRR6 644 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
CDK5RAP3-201ENST00000338399 KHDRBS3O75525 346 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR2T7P0C7T2 308 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SELENOPP49908 381 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 THEM4Q5T1C6 240 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SSX6Q7RTT6 188 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SLC16A9Q7RTY1 509 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SIAH3Q8IW03 269 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR2T27Q8NH04 317 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FNDC9Q8TBE3 224 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 SPRYD4Q8WW59 207 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 DGCR14Q96DF8 476 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 OR2M2Q96R28 347 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 FUNDC2Q9BWH2 189 aa13.1□□□□□ -0.31
CDK5RAP3-201ENST00000338399 TTTY10Q9BZA0 68 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms