RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 LYZL6O75951 148 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 ITGA5P08648 1049 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 CDH2P19022 906 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 COX5AP20674 150 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 MPGP29372 298 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 RAD23AP54725 363 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 NPRL3Q12980 569 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 ITGADQ13349 1161 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 PTGES3Q15185 160 aaKnown RBP12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZIK1Q3SY52 487 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 SFRP5Q5T4F7 317 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 OGFRL1Q5TC84 451 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 ACSM5Q6NUN0 579 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 LEG1Q6P5S2 330 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 STAC2Q6ZMT1 411 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 PTCHD4Q6ZW05 846 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 ADCK1Q86TW2 530 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 GALNT4Q8N4A0 578 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 SDR9C7Q8NEX9 313 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZNF837Q96EG3 531 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 NMNAT3Q96T66 252 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC25A19Q9HC21 320 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 TAS2R16Q9NYV7 291 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 KLHL21Q9UJP4 597 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 CIB4A0PJX0 185 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 A1L4Q6 167 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 RPL36A-HNRNPH2H7BZ11 118 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 AHCYL1O43865 530 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLC2A10O95528 541 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 RENP00797 406 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 IFNGP01579 166 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 NR2C1P13056 603 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 PSMB1P20618 241 aaKnown RBP12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 EPHA2P29317 976 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 UGT2B10P36537 528 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 POLR2IP36954 125 aaKnown RBP12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 FMODQ06828 376 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 BHLHA15Q7RTS1 189 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZNF433Q8N7K0 673 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 FNDC8Q8TC99 324 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 KISS1RQ969F8 398 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 NMD3Q96D46 503 aaKnown RBP12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 TEX12Q9BXU0 123 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 HDHD5Q9BXW7 423 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 VSX1Q9NZR4 365 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 GPR52Q9Y2T5 361 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 ALPK2Q86TB3 2170 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 FLNCQ14315 2725 aa12.39□□□□□ -0.43
APOBEC3B-202ENST00000335760 HCFC1P51610 2035 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 IGKV1D-43A0A0B4J1Z2 117 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 RIIAD1A6NNX1 92 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZAR1LA6NP61 321 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 PRSS44E7EML9 344 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 C19orf84I3L1E1 186 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 DHHO43323 396 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLC16A7O60669 478 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 RAD51DO75771 328 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 SNAP29O95721 258 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 CLDN1O95832 211 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 HMGN1P05114 100 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 IL32P24001 234 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 PCYT1AP49585 367 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZNF84P51523 738 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 TGFBR3Q03167 851 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLX4IPQ5VYV7 408 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLC25A47Q6Q0C1 308 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 PACRGLQ8N7B6 248 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 CYB561A3Q8NBI2 242 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLC37A3Q8NCC5 494 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 NPEPL1Q8NDH3 523 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 NSMAFQ92636 917 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 SNX18Q96RF0 628 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 MBOAT4Q96T53 435 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 SYT4Q9H2B2 425 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 TOR3AQ9H497 397 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 RERGLQ9H628 205 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 C8orf4Q9NR00 106 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 CMC2Q9NRP2 79 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 TVP23BQ9NYZ1 205 aa12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 KLF2Q9Y5W3 355 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3B-202ENST00000335760 TENM4Q6N022 2769 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR6C68A6NDL8 312 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZNF99A8MXY4 864 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 SURF4O15260 269 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZNF3P17036 446 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 CCKARP32238 428 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZNF133P52736 654 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 SH3BGRP55822 239 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 SNTB1Q13884 538 aaKnown RBP12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 CRMP1Q14194 572 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 STK11Q15831 433 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 GABRA6Q16445 453 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms