RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 UPB1Q9UBR1 384 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 PCDHB10Q9UN67 800 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 MUC22E2RYF6 1773 aaPredicted RBP13.12□□□□□ -0.31
SNX20-202ENST00000330943 RAB3DO95716 219 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 WNT11O96014 354 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 IGKV1D-16P01601 117 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ITGA5P08648 1049 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 CCDC157Q569K6 752 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 OR1S2Q8NGQ3 325 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 SEC22AQ96IW7 307 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 OR2A5Q96R48 311 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 PTDSS2Q9BVG9 487 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ATG5Q9H1Y0 275 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ASF1BQ9NVP2 202 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 TNFSF18Q9UNG2 199 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 KCNK7Q9Y2U2 307 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 OR4C45A6NMZ5 311 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 H7C1C5 153 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 SLC25A12O75746 678 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 GPR75O95800 540 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ABHD16AO95870 558 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 SMIM10L1P0DMW3 83 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 LIPCP11150 499 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 DLSTP36957 453 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 AQP2P41181 271 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 LCN6P62502 163 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 MGAT2Q10469 447 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 GUCA2BQ16661 112 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ARHGAP40Q5TG30 622 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 RNF44Q7L0R7 432 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 CBLN2Q8IUK8 224 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 WDFY3Q8IZQ1 3526 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 OR2G2Q8NGZ5 317 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 TSEN15Q8WW01 171 aaKnown RBP13.12□□□□□ -0.31
SNX20-202ENST00000330943 SMIM10Q96HG1 83 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 MNTQ99583 582 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 POTEKPQ9BYX7 375 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ALX4Q9H161 411 aaPredicted RBP13.12□□□□□ -0.31
SNX20-202ENST00000330943 PIGMQ9H3S5 423 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 SCPEP1Q9HB40 452 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 COMMD9Q9P000 198 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 LAMP5Q9UJQ1 280 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ERVK-19Q9WJR5 959 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 TRBV5-7A0A0A0MS05 114 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 CDC40O60508 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNX20-202ENST00000330943 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
SNX20-202ENST00000330943 NKX2-2O95096 273 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 EML2O95834 649 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 CD8AP01732 235 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 AMY2AP04746 511 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 LINC00271P0C7V0 271 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 BDKRB2P30411 391 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 SCAND1P57086 179 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 SNTB1Q13884 538 aaKnown RBP13.11□□□□□ -0.31
SNX20-202ENST00000330943 C2orf76Q3KRA6 126 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 DGAT2L6Q6ZPD8 337 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 GALNT16Q8N428 558 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 C10orf53Q8N6V4 93 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 CAMKVQ8NCB2 501 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 OR5M8Q8NGP6 311 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 OR6N2Q8NGY6 317 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 GPR148Q8TDV2 347 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 ASB12Q8WXK4 309 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 WNT2BQ93097 391 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 TINAGL1Q9GZM7 467 aaPredicted RBP13.11□□□□□ -0.31
SNX20-202ENST00000330943 KIR3DX1Q9H7L2 352 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 POLE3Q9NRF9 147 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 NOP16Q9Y3C1 178 aaKnown RBP13.11□□□□□ -0.31
SNX20-202ENST00000330943 MRPS23Q9Y3D9 190 aaKnown RBP13.11□□□□□ -0.31
SNX20-202ENST00000330943 COLEC10Q9Y6Z7 277 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 DMDP11532 3685 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 URADA6NGE7 173 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 DCTN6O00399 190 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 OR2F2O95006 317 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 PVALBP20472 110 aaPredicted RBP13.11□□□□□ -0.31
SNX20-202ENST00000330943 ACTBP60709 375 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 ACTG1P63261 375 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 PSG6Q00889 435 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 OR2F1Q13607 317 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 GAB4Q2WGN9 574 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 PAN3Q58A45 887 aaKnown RBP13.11□□□□□ -0.31
SNX20-202ENST00000330943 C11orf87Q6NUJ2 197 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 ZNF595Q8IYB9 648 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 PMM1Q92871 262 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 FAM3DQ96BQ1 224 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 TM4SF19Q96DZ7 209 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 TOX2Q96NM4 488 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 LMF1Q96S06 567 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 SRMSQ9H3Y6 488 aa13.11□□□□□ -0.31
SNX20-202ENST00000330943 A0A087WUJ7 227 aa13.1□□□□□ -0.31
SNX20-202ENST00000330943 A0A1W2PP55 124 aa13.1□□□□□ -0.31
SNX20-202ENST00000330943 RNF222A6NCQ9 220 aa13.1□□□□□ -0.31
SNX20-202ENST00000330943 OR14I1A6ND48 311 aa13.1□□□□□ -0.31
SNX20-202ENST00000330943 RAD1O60671 282 aa13.1□□□□□ -0.31
SNX20-202ENST00000330943 NAT2P11245 290 aa13.1□□□□□ -0.31
SNX20-202ENST00000330943 ZNF10P21506 573 aaPredicted RBP13.1□□□□□ -0.31
SNX20-202ENST00000330943 CD34P28906 385 aa13.1□□□□□ -0.31
SNX20-202ENST00000330943 DHRS2Q13268 280 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms