RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 TNFSF11O14788 317 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 HS3ST1O14792 307 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 RPS27P42677 84 aaKnown RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 MFAP5Q13361 173 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 DPY19L2P2Q6ZN68 376 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 MISPQ8IVT2 679 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 STT3BQ8TCJ2 826 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 RNF32Q9H0A6 362 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 SPNS1Q9H2V7 528 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 SMOC1Q9H4F8 434 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 INPP5EQ9NRR6 644 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 KCND3Q9UK17 655 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 SMLR1H3BR10 107 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 I6L893 689 aaPredicted RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 SULT1C2O00338 296 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 HSD17B6O14756 317 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 OR2J2O76002 312 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 SNAPINO95295 136 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 CEACAM5P06731 702 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 DEFB109BQ30KR1 87 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 XKR7Q5GH72 579 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 PPP1R35Q8TAP8 253 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 TINAGL1Q9GZM7 467 aaPredicted RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 BANF2Q9H503 90 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 TMEM38AQ9H6F2 299 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 TRPM6Q9BX84 2022 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 M0QYG6 137 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 M0R082 166 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 IGHEP01854 428 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 HTR1FP30939 366 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 GDPGP1Q6ZNW5 385 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 DMBX1Q8NFW5 382 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 BAHD1Q8TBE0 780 aaPredicted RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 CSF3RQ99062 836 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 LTBP4Q8N2S1 1624 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 TFF2Q03403 129 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 ALKBH1Q13686 389 aaKnown RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 NXNL2Q5VZ03 156 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 RPS19BP1Q86WX3 136 aaKnown RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 OR6V1Q8N148 313 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 ZADH2Q8N4Q0 377 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 UBQLN3Q9H347 655 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 C19orf12Q9NSK7 152 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 RPS10-NUDT3A0A1W2PQS6 291 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 TNFRSF10CO14798 259 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 FCMRO60667 390 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 EDDM3BP56851 147 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 PAN3Q58A45 887 aaKnown RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 METAP1DQ6UB28 335 aaPredicted RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 CYHR1Q6ZMK1 362 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 ST7LQ8TDW4 575 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 FOXRED1Q96CU9 486 aaPredicted RBP9.34□□□□□ -0.91
CHD3-201ENST00000330494 RAB3CQ96E17 227 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 SEMA4CQ9C0C4 833 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 IKZF5Q9H5V7 419 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 HRH3Q9Y5N1 445 aa9.34□□□□□ -0.91
CHD3-201ENST00000330494 ABCA3Q99758 1704 aa9.34□□□□□ -0.92
CHD3-201ENST00000330494 MARF1Q9Y4F3 1742 aaKnown RBP9.34□□□□□ -0.92
CHD3-201ENST00000330494 SURF4O15260 269 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 PPM1DO15297 605 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 ATG12O94817 140 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 LGI1O95970 557 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 AGFG1P52594 562 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 BBS1Q8NFJ9 593 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 OR1N1Q8NGS0 311 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 MED30Q96HR3 178 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TRIB1Q96RU8 372 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 SGPP1Q9BX95 441 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TMEM59Q9BXS4 323 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 COPS3Q9UNS2 423 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TEX51A0A1B0GUA7 166 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 KLRC4-KLRK1H3BQV0 150 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 NXPH2O95156 264 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 NAT1P18440 290 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 HTR2CP28335 458 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 B4GALNT1Q00973 533 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 GLYATL3Q5SZD4 288 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 AADACL3Q5VUY0 350 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 CA13Q8N1Q1 262 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 OR56B2PQ8NGI1 322 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 ZNF419Q96HQ0 510 aaPredicted RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 LUZP4Q9P127 313 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 MRPS14O60783 128 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 GABRG2P18507 467 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 ELAVL1Q15717 326 aaKnown RBP9.33□□□□□ -0.92
CHD3-201ENST00000330494 TATDN3Q17R31 274 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 ALKBH6Q3KRA9 238 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 DPPA2Q7Z7J5 298 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 TMEM178AQ8NBL3 297 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 GPR119Q8TDV5 335 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 PRRT1Q99946 306 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 NICN1Q9BSH3 213 aa9.33□□□□□ -0.92
CHD3-201ENST00000330494 UNKLQ9H9P5 680 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms