RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 OR6V1Q8N148 313 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 FNDC9Q8TBE3 224 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 TMIGD2Q96BF3 282 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 DUSP15Q9H1R2 295 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 NPAP1Q9NZP6 1156 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 ZIC1Q15915 447 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 OR6F1Q8NGZ6 308 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF486Q96H40 463 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 TECTBQ96PL2 329 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 NUDT22Q9BRQ3 303 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 MRPS28Q9Y2Q9 187 aaKnown RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 PCDHGA5Q9Y5G8 931 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 CCDC163A0A0D9SF12 145 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 RAD1O60671 282 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 MTCP1P56278 107 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 TOMM34Q15785 309 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 AADACL4Q5VUY2 407 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 SFRP4Q6FHJ7 346 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 TSSK4Q6SA08 328 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 SULF2Q8IWU5 870 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 DTWD2Q8NBA8 298 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 CNRIP1Q96F85 164 aaPredicted RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 CMSS1Q9BQ75 279 aaKnown RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 SYNPO2LQ9H987 977 aa10.45□□□□□ -0.74
COL4A5-201ENST00000328300 TXNL4BQ9NX01 149 aaKnown RBP10.45□□□□□ -0.74
COL4A5-201ENST00000328300 A0A0G2JMP0 313 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF891A8MT65 544 aaPredicted RBP10.44□□□□□ -0.74
COL4A5-201ENST00000328300 XRCC2O43543 280 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 RGS11O94810 467 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 MT-CO3P00414 261 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SBK2P0C263 348 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 PNLIPP16233 465 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 TUBG1P23258 451 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ARRB2P32121 409 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ALDH3B2P48448 385 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SNRPD2P62316 118 aaKnown RBP10.44□□□□□ -0.74
COL4A5-201ENST00000328300 OR4M2Q8NGB6 313 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 OR4M1Q8NGD0 313 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 TEAD3Q99594 435 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 CDX2Q99626 313 aaPredicted RBP10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SCPEP1Q9HB40 452 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 COQ3Q9NZJ6 369 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 LRFN1Q9P244 771 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 GREB1LQ9C091 1923 aaPredicted RBP10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SLC22A23A1A5C7 686 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 M0R082 166 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 TNFSF14O43557 240 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 TIMM8AO60220 97 aaPredicted RBP10.44□□□□□ -0.74
COL4A5-201ENST00000328300 CD160O95971 181 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 DLX5P56178 289 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 DPY19L4Q7Z388 723 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 MENTQ9BUN1 341 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SLC25A31Q9H0C2 315 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 CALHM2Q9HA72 323 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SGCEO43556 437 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF44P15621 663 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ISL1P61371 349 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SPOCK1Q08629 439 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SYT14P1Q58G82 188 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SFXN4Q6P4A7 337 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 UPRTQ96BW1 309 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 PIP5K1CO60331 668 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ICOSLGO75144 302 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 COL9A1P20849 921 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 CX3CR1P49238 355 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 MEP1BQ16820 701 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ZNF610Q8N9Z0 462 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 IL17RDQ8NFM7 739 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 TSLPQ969D9 159 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 RTL8AQ9BWD3 113 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 EXOSC3Q9NQT5 275 aaKnown RBP10.44□□□□□ -0.74
COL4A5-201ENST00000328300 KRBA1A5PL33 1030 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 SLC22A5O76082 557 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 ETHE1O95571 254 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 IL3RAP26951 378 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 TNFSF8P32971 234 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 NKAIN4Q8IVV8 208 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 LOXL4Q96JB6 756 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 NKX3-1Q99801 234 aaPredicted RBP10.44□□□□□ -0.74
COL4A5-201ENST00000328300 FAM173AQ9BQD7 235 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 EGLN1Q9GZT9 426 aa10.44□□□□□ -0.74
COL4A5-201ENST00000328300 LOC100289279A0A1B0GTE1 492 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 HMX3A6NHT5 357 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 DOK2O60496 412 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 LAP3P28838 519 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 RPL23AP62750 156 aaKnown RBP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL4A5-201ENST00000328300 VWA2Q5GFL6 755 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 OR2G6Q5TZ20 316 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 TMEM92Q6UXU6 159 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 WDR5BQ86VZ2 330 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 GALNT11Q8NCW6 608 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 OR56B4Q8NH76 319 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 TMEM106AQ96A25 262 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 DCBLD2Q96PD2 775 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 NEU3Q9UQ49 428 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 ARGFXA6NJG6 315 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 FXYD1O00168 92 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 CRYZL1O95825 349 aa10.43□□□□□ -0.74
COL4A5-201ENST00000328300 NFYAP23511 347 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms